G249674


Basic Information

Item Value
gene id G249674
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 3742660 ~ 3743084 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU283347
GGAAAACTTAGGAATAATTTTGTACTGCAATGTAAACATAGACAATGTAAGATATATGAGTGACAAATTTTGTTTGTTGGTGGATGATCTTTGCTAGTTTTATGGAAGAATGATTTTATGGAAGTTGATTTGAGACATGTATGATGTTGTTTTGGTAGTTTTTGTGCATTTTAAATGTGAAATTCACTGCTGTGCACAGAAGAACGTTGGTTAGGAGAACAGTGTGAAGACGAGTTTTGAAAAATTATTGAGTATTGAGAAATGGGTCCTAGCGATTGTTAAAAATAAATAAATAAATATAAAACTGTAAATGCAAAAAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283347 True 323 lncRNA 0.30 2 3742660 3743084

Neighbor

gene id symbol gene type direction distance location
CI01000058_03645458_03659734 NA coding upstream 82898 3645458 ~ 3659762 (+)
CI01000058_03644271_03645229 NA coding upstream 97431 3644271 ~ 3645229 (+)
CI01000058_03503653_03506062 NA coding upstream 236364 3503378 ~ 3506296 (+)
CI01000058_03201861_03220295 TAF4A, TAF4 coding upstream 521936 3200982 ~ 3220724 (+)
CI01000058_03181624_03193630 SLC6A14 coding upstream 546736 3181420 ~ 3195924 (+)
CI01000058_03846867_03850723 SYNPR, NAMPTB coding downstream 103783 3846867 ~ 3850723 (+)
CI01000058_03889526_03896649 SYNPR coding downstream 146230 3889314 ~ 3896755 (+)
CI01000058_03915537_03946197 ATXN7 coding downstream 171838 3914922 ~ 3948073 (+)
CI01000058_03959155_03965275 SLC2A9L1 coding downstream 216071 3959155 ~ 3965598 (+)
CI01000058_04174884_04175951 RHOL coding downstream 431716 4174800 ~ 4176830 (+)
G249669 NA non-coding upstream 10476 3721277 ~ 3732184 (+)
G249664 NA non-coding upstream 32581 3706832 ~ 3710079 (+)
G249662 NA non-coding upstream 41588 3683476 ~ 3701072 (+)
G249660 NA non-coding upstream 62793 3679607 ~ 3679867 (+)
G249653 NA non-coding upstream 85384 3657077 ~ 3657276 (+)
G249675 NA non-coding downstream 961 3744045 ~ 3752080 (+)
G249692 NA non-coding downstream 31539 3774623 ~ 3775311 (+)
G249767 NA non-coding downstream 260579 4003663 ~ 4003971 (+)
G249769 NA non-coding downstream 262974 4006058 ~ 4006271 (+)
G249770 NA non-coding downstream 264231 4007315 ~ 4007534 (+)
CI01000058_01794468_01800421 KISS1 other upstream 1944928 1794468 ~ 1800421 (+)
G247940 NA other upstream 2286213 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 2454390 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 3145489 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 3286916 434913 ~ 455744 (+)
G250039 NA other downstream 951324 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 1083292 4864571 ~ 4888216 (+)

Expression


Co-expression Network