G249767


Basic Information

Item Value
gene id G249767
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4003663 ~ 4003971 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU283457
GTCAGAATTGGGTCATATAAACTTGCAATTGTGTGTCATAAACTCGCAATTCTGAGAAAGTTTTTTTTCCTCGCAGTTATGACTTTTTTCTCACAAATGCGAGTTTATAGCTTGCAATTCTGACTTCTTTTCTCAGAATTTTGAAACAAACTAAATTCTGAGAAAAAAAGTCACTTTTTCCCCCTCAGAATTGGACTTTTAAATTGTGAGTTTATATCTCGCAATTCTGACTTTGAGATGTAAACTCACAATTGCGAGAAAAAAAGTCAGAATTGTGAGGTGCAATTATCTTTTCTTTTTATTATTCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283457 True 309 lncRNA 0.33 1 4003663 4003971

Neighbor

gene id symbol gene type direction distance location
CI01000058_03959155_03965275 SLC2A9L1 coding upstream 38065 3959155 ~ 3965598 (+)
CI01000058_03915537_03946197 ATXN7 coding upstream 55590 3914922 ~ 3948073 (+)
CI01000058_03889526_03896649 SYNPR coding upstream 106908 3889314 ~ 3896755 (+)
CI01000058_03846867_03850723 SYNPR, NAMPTB coding upstream 152940 3846867 ~ 3850723 (+)
CI01000058_03645458_03659734 NA coding upstream 343901 3645458 ~ 3659762 (+)
CI01000058_04174884_04175951 RHOL coding downstream 170829 4174800 ~ 4176830 (+)
CI01000058_04263520_04265153 NA coding downstream 259153 4263124 ~ 4265628 (+)
CI01000058_04272001_04275349 NA coding downstream 267935 4271906 ~ 4275431 (+)
CI01000058_04303891_04308850 NA coding downstream 299833 4303804 ~ 4308997 (+)
CI01000058_04344622_04358133 NA coding downstream 339050 4343021 ~ 4358133 (+)
G249692 NA non-coding upstream 228352 3774623 ~ 3775311 (+)
G249675 NA non-coding upstream 251583 3744045 ~ 3752080 (+)
G249674 NA non-coding upstream 260579 3742660 ~ 3743084 (+)
G249669 NA non-coding upstream 271479 3721277 ~ 3732184 (+)
G249664 NA non-coding upstream 293584 3706832 ~ 3710079 (+)
G249769 NA non-coding downstream 2087 4006058 ~ 4006271 (+)
G249770 NA non-coding downstream 3344 4007315 ~ 4007534 (+)
G249771 NA non-coding downstream 6983 4010954 ~ 4011153 (+)
G249773 NA non-coding downstream 14526 4018497 ~ 4018753 (+)
G249774 NA non-coding downstream 15498 4019469 ~ 4019693 (+)
CI01000058_01794468_01800421 KISS1 other upstream 2205931 1794468 ~ 1800421 (+)
G247940 NA other upstream 2547216 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 2715393 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 3406492 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 3547919 434913 ~ 455744 (+)
G250039 NA other downstream 690437 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 822405 4864571 ~ 4888216 (+)

Expression


Co-expression Network