G249770


Basic Information

Item Value
gene id G249770
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4007315 ~ 4007534 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU283460
GGGATGGAGTGTTTGTGTGTGTGTGTGAGGGACACTGGATATGGAGAAGGTTTGGTGTTAAACTGCAGTTCTTGGTCCATTTTACTTATATCTACACTCTTCCTATGCTTTTCACAGTGCGCTTGTTTCTCGCAGACTCCCTTGGCTTCATACACAGACACTCCTCTGTATGGGACGTCCCAGAGACGGATCAGAGTGCAGGGATAGAGTGGAGTTATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283460 True 220 lncRNA 0.47 1 4007315 4007534

Neighbor

gene id symbol gene type direction distance location
CI01000058_03959155_03965275 SLC2A9L1 coding upstream 41717 3959155 ~ 3965598 (+)
CI01000058_03915537_03946197 ATXN7 coding upstream 59242 3914922 ~ 3948073 (+)
CI01000058_03889526_03896649 SYNPR coding upstream 110560 3889314 ~ 3896755 (+)
CI01000058_03846867_03850723 SYNPR, NAMPTB coding upstream 156592 3846867 ~ 3850723 (+)
CI01000058_03645458_03659734 NA coding upstream 347553 3645458 ~ 3659762 (+)
CI01000058_04174884_04175951 RHOL coding downstream 167266 4174800 ~ 4176830 (+)
CI01000058_04263520_04265153 NA coding downstream 255590 4263124 ~ 4265628 (+)
CI01000058_04272001_04275349 NA coding downstream 264372 4271906 ~ 4275431 (+)
CI01000058_04303891_04308850 NA coding downstream 296270 4303804 ~ 4308997 (+)
CI01000058_04344622_04358133 NA coding downstream 335487 4343021 ~ 4358133 (+)
G249769 NA non-coding upstream 1044 4006058 ~ 4006271 (+)
G249767 NA non-coding upstream 3344 4003663 ~ 4003971 (+)
G249692 NA non-coding upstream 232004 3774623 ~ 3775311 (+)
G249675 NA non-coding upstream 255235 3744045 ~ 3752080 (+)
G249674 NA non-coding upstream 264231 3742660 ~ 3743084 (+)
G249771 NA non-coding downstream 3420 4010954 ~ 4011153 (+)
G249773 NA non-coding downstream 10963 4018497 ~ 4018753 (+)
G249774 NA non-coding downstream 11935 4019469 ~ 4019693 (+)
G249776 NA non-coding downstream 17166 4024700 ~ 4054447 (+)
G249839 NA non-coding downstream 108118 4115652 ~ 4116392 (+)
CI01000058_01794468_01800421 KISS1 other upstream 2209583 1794468 ~ 1800421 (+)
G247940 NA other upstream 2550868 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 2719045 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 3410144 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 3551571 434913 ~ 455744 (+)
G250039 NA other downstream 686874 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 818842 4864571 ~ 4888216 (+)

Expression


Co-expression Network