G249773


Basic Information

Item Value
gene id G249773
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4018497 ~ 4018753 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU283463
AAAAAATTTCCCCAAAATCGCATTTTAACTTCAGTTGTCCCCTACATACCCAAATACCCACTACTGTGGATGTTATCCCAAAAAATGCCACTGCTCCTCTACTCTGTACATCATCTGCTGTAGTTGGGAAATCAATTATGAGCAACTGTGCATTTTCACTTGTTTGGAAAAGACTCCTCAATGATTGTGTGTCCCTGAGGTAAACAAGAGAGGAAAGGGAACAGAGCCAGAGAAAGAGAACAAATGCTTGATTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283463 True 257 lncRNA 0.40 1 4018497 4018753

Neighbor

gene id symbol gene type direction distance location
CI01000058_03959155_03965275 SLC2A9L1 coding upstream 52899 3959155 ~ 3965598 (+)
CI01000058_03915537_03946197 ATXN7 coding upstream 70424 3914922 ~ 3948073 (+)
CI01000058_03889526_03896649 SYNPR coding upstream 121742 3889314 ~ 3896755 (+)
CI01000058_03846867_03850723 SYNPR, NAMPTB coding upstream 167774 3846867 ~ 3850723 (+)
CI01000058_03645458_03659734 NA coding upstream 358735 3645458 ~ 3659762 (+)
CI01000058_04174884_04175951 RHOL coding downstream 156047 4174800 ~ 4176830 (+)
CI01000058_04263520_04265153 NA coding downstream 244371 4263124 ~ 4265628 (+)
CI01000058_04272001_04275349 NA coding downstream 253153 4271906 ~ 4275431 (+)
CI01000058_04303891_04308850 NA coding downstream 285051 4303804 ~ 4308997 (+)
CI01000058_04344622_04358133 NA coding downstream 324268 4343021 ~ 4358133 (+)
G249771 NA non-coding upstream 7344 4010954 ~ 4011153 (+)
G249770 NA non-coding upstream 10963 4007315 ~ 4007534 (+)
G249769 NA non-coding upstream 12226 4006058 ~ 4006271 (+)
G249767 NA non-coding upstream 14526 4003663 ~ 4003971 (+)
G249692 NA non-coding upstream 243186 3774623 ~ 3775311 (+)
G249774 NA non-coding downstream 716 4019469 ~ 4019693 (+)
G249776 NA non-coding downstream 5947 4024700 ~ 4054447 (+)
G249839 NA non-coding downstream 96899 4115652 ~ 4116392 (+)
G249869 NA non-coding downstream 135494 4154247 ~ 4154491 (+)
G249873 NA non-coding downstream 151837 4170590 ~ 4171092 (+)
CI01000058_01794468_01800421 KISS1 other upstream 2220765 1794468 ~ 1800421 (+)
G247940 NA other upstream 2562050 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 2730227 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 3421326 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 3562753 434913 ~ 455744 (+)
G250039 NA other downstream 675655 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 807623 4864571 ~ 4888216 (+)

Expression


Co-expression Network