G249869


Basic Information

Item Value
gene id G249869
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4154247 ~ 4154491 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU283567
CTTTTAGTTAATAAAATATGTTATTAAAGAATTAATACATTATGGCACATTTAATTAATAACAATTCATATATTACTTAATCTATTAATCATATAGAAACTTTATTAGTTGCAGATGCAGTAATCATTAATAAATGGTTTAGTTCTTCATGAGTCATACATTAACACATGATTATCTGTGCATTAGTTAAGCATGAATTAATGCATATTAGTGCACCCGTATTGTAAAGTGTTACCTTTATTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283567 True 245 lncRNA 0.24 1 4154247 4154491

Neighbor

gene id symbol gene type direction distance location
CI01000058_03959155_03965275 SLC2A9L1 coding upstream 188649 3959155 ~ 3965598 (+)
CI01000058_03915537_03946197 ATXN7 coding upstream 206174 3914922 ~ 3948073 (+)
CI01000058_03889526_03896649 SYNPR coding upstream 257492 3889314 ~ 3896755 (+)
CI01000058_03846867_03850723 SYNPR, NAMPTB coding upstream 303524 3846867 ~ 3850723 (+)
CI01000058_03645458_03659734 NA coding upstream 494485 3645458 ~ 3659762 (+)
CI01000058_04174884_04175951 RHOL coding downstream 20309 4174800 ~ 4176830 (+)
CI01000058_04263520_04265153 NA coding downstream 108633 4263124 ~ 4265628 (+)
CI01000058_04272001_04275349 NA coding downstream 117415 4271906 ~ 4275431 (+)
CI01000058_04303891_04308850 NA coding downstream 149313 4303804 ~ 4308997 (+)
CI01000058_04344622_04358133 NA coding downstream 188530 4343021 ~ 4358133 (+)
G249839 NA non-coding upstream 37855 4115652 ~ 4116392 (+)
G249776 NA non-coding upstream 99800 4024700 ~ 4054447 (+)
G249774 NA non-coding upstream 134554 4019469 ~ 4019693 (+)
G249773 NA non-coding upstream 135494 4018497 ~ 4018753 (+)
G249771 NA non-coding upstream 143094 4010954 ~ 4011153 (+)
G249873 NA non-coding downstream 16099 4170590 ~ 4171092 (+)
G249886 NA non-coding downstream 63437 4217928 ~ 4218769 (+)
G249899 NA non-coding downstream 85746 4240237 ~ 4240895 (+)
G249970 NA non-coding downstream 186281 4340772 ~ 4340984 (+)
G249981 NA non-coding downstream 209216 4363707 ~ 4413637 (+)
CI01000058_01794468_01800421 KISS1 other upstream 2356515 1794468 ~ 1800421 (+)
G247940 NA other upstream 2697800 1452997 ~ 1456447 (+)
CI01000058_01280337_01289153 DNASE2B other upstream 2865977 1278592 ~ 1289874 (+)
CI01000058_00592498_00596709 NA other upstream 3557076 592331 ~ 597171 (+)
CI01000058_00435196_00437830 AGTRAP other upstream 3698503 434913 ~ 455744 (+)
G250039 NA other downstream 539917 4694408 ~ 4697161 (+)
CI01000058_04864571_04888198 NA other downstream 671885 4864571 ~ 4888216 (+)

Expression


Co-expression Network