XLOC_010149 (hint3)


Basic Information

Item Value
gene id XLOC_010149
gene name hint3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 40024883 ~ 40031779 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020127
GTTCGTGATGATGTAATTATCGCTGACGTCACGTTTTGAAGATGGCAGACGCCGCAAACACACCGACACCTGAGAGCTGTATAGCAAGTCATTCTGATGAAGAATatgacaaaaaatgtattttctgtaaAATCTTAAAGGGTGAGATGGGAACAGAGCTTCTACACAGCGATGAGACTGTGTCCTGTTTCCAAGATATCCACCCTGGAGCTCCTCATCACTATCTGGTTGTGCCAAGTAAACATGTTGGCAATTGCAAATCTCTCAGCAAAGAGCACGTACCGTTAGTGGAAAAGATGCTGGAAACGGGGAAAGAGATACTTGAGAAGAACAATGTGACTGATTTAAGTGATGTTAGGTTTGGCTTCCATTGGCCTCCATTCTGCTCCGTCACACATCTACATCTTCATGTTCTCGCACCCGTCAGTCAGATGGGCTTCATGTCACGTTTGATCTACAGGTTAAACTCGTATTGGTTCGTTACGGCAGACCAGTTACTCCAAAGACTGAACTCTATGGGCTAAATATTACCACACTAATGTAGTGTATTGAAACTCCAAATAACACTAAAGATTGAGATGCCCAGAGCCATGTTACTAATAACAACCGTCCAATCTGTTTGTGATGACGGAAGGTCACAGTTGAGTGCCTCTGGGTTATAATACTCATTAATGCTGCAATCATTGTTAGTTATATCATCGGCCAGACGGGCTAATCAAATTTGCAGCTACTTTTGAATTGCTTGTGAACAAAAAAGGCATGCAGAATAGTAATGACACTGATAATTTTGACAGAATCATTAATCTTTTATGGTGAACAGTTG

Function

symbol description
hint3 Predicted to enable catalytic activity. Orthologous to human HINT3 (histidine triad nucleotide binding protein 3).

GO:

id name namespace
GO:0005575 cellular_component cellular_component
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-100922-168 Predicted to enable catalytic activity. Orthologous to human HINT3 (histidine triad nucleotide binding protein 3).

Ensembl:

ensembl_id ENSDARG00000074286

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020127 True 823 mRNA 0.41 5 40024883 40031779

Neighbor

gene id symbol gene type direction distance location
XLOC_010148 CT025588.2 coding upstream 12892 40011869 ~ 40011991 (+)
XLOC_010147 NA coding upstream 47495 39972169 ~ 39977388 (+)
XLOC_010146 NA coding upstream 58508 39952357 ~ 39966375 (+)
XLOC_010145 NA coding upstream 122943 39857185 ~ 39901940 (+)
XLOC_010144 NA coding upstream 392815 39631610 ~ 39632068 (+)
XLOC_010150 trmt11 coding downstream 11894 40043673 ~ 40074145 (+)
XLOC_010151 CT025588.3 coding downstream 43766 40075545 ~ 40082056 (+)
XLOC_010152 NA coding downstream 51123 40082902 ~ 40114807 (+)
XLOC_010153 NA coding downstream 99685 40131464 ~ 40339027 (+)
XLOC_010154 BX470182.2 coding downstream 151964 40183743 ~ 40183859 (+)
XLOC_010157 BX072576.2 non-coding downstream 314668 40346447 ~ 40354078 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000016_00775184_00778097 HINT3 coding CI01000016 null 774658 ~ 778097 (-)