XLOC_010158 (BX072576.1)


Basic Information

Item Value
gene id XLOC_010158
gene name BX072576.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 40463365 ~ 40464426 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020145
ATGCCAGAGGAGCTCACTAACTGCAGTCTGTGTTGCTGTACCACGACCAACAAAATATTCATGGTGGTCTTCATGATATCACTCATACTTGCTATACTATTCGGAAACCTCCTGACACTGGCGGTGGTCTCTGGAACCAAACACTTCCACACTCCCCAGGGGTATTTAAAAGCATCACTGGCCGTGGCAGACCTGGCTGTGGGCGTTTTTGTGGTTCCCATTTCAGTCTACACAGAAATATCTCTAATGGTTTACAACTCGATGCCAGAGTGGACAACGCGCAATTCCCAAACCTCACCTTTCCACCCGTGCAGTTTCATCGGTCCTGTGTTTGCGGGATGCACTTTGGTTTCCATTACAACCATTTTCCTCCTGACTATTGAAAGGAGCATTGCTGTTTTGAAGCCACTGCACAAGGAATCTGTCATAACTAAAAAGAGAACAAGCATACTAATAGTGTTTTCCTGGATGGGCAGTTTTTTCCTGGCAATATCTCCAATGGTTTTCAGCAACGAAATCGCGCTGGAGTACAATCCTTGCAGCCGAATGTGCAATTACGCGCTGGGAAGCGCAGACTTCCCATCCAGAGCTTGGAAAATTCTTTTACTCTTCCCTGCCTTTGACTTTACGCTGCTCGGAGGTACAGTTGTCATCAATATCATATCCCTCACCACAATCCGCCAGCATTCAAAAAGAAGAAAACACCTGGCAGAGACCGAGAACCAAAGCGCAACGAAGCCAACCTTCTCCGACATCAAGGCTGCCAAGACGATAGGGACCCTCACTTTGGCGTTCACCGCTTCCTTTACTCCCATTGCCGTGTTTGTAGTTGGAAATGTGCTGGGAAACGAATGGTGCACTTTTTCGTTTTTTGCCTTTTGGATTTTGACGACGAACAGCTGCTGGAATGTGATAATCTATGGCGTGAGAGACCAGAAGTTTAGAAGTCGCGCGTGTCAGCTGCTTACCTCAGCTCGATTGAACACTGCATCTAAGAAAACCGAGTACGAAAACACTGTAAATGGCGGGAAAACCGACGAGGAAGCAGCCAAGCAACCCTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000078204

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020145 True 1062 mRNA 0.47 1 40463365 40464426

Neighbor

gene id symbol gene type direction distance location
XLOC_010157 BX072576.2 coding upstream 109287 40346447 ~ 40354078 (+)
XLOC_010156 mettl6 coding upstream 117993 40340222 ~ 40345372 (+)
XLOC_010153 NA coding upstream 124338 40131464 ~ 40339027 (+)
XLOC_010155 BX470182.1 coding upstream 242445 40217043 ~ 40220920 (+)
XLOC_010154 BX470182.2 coding upstream 279506 40183743 ~ 40183859 (+)
XLOC_010159 nagpa coding downstream 44456 40508882 ~ 40541981 (+)
XLOC_010160 tp53inp1 coding downstream 96196 40560622 ~ 40569769 (+)
XLOC_010161 ccne2 coding downstream 111316 40575742 ~ 40586793 (+)
XLOC_010162 NA coding downstream 408815 40873241 ~ 40893518 (+)
XLOC_010163 NA coding downstream 477311 40941737 ~ 40945757 (+)
XLOC_010152 NA non-coding upstream 348558 40082902 ~ 40114807 (+)
XLOC_010151 CT025588.3 non-coding upstream 381309 40075545 ~ 40082056 (+)
XLOC_010166 NA non-coding downstream 572221 41036647 ~ 41054652 (+)
XLOC_010168 NA non-coding downstream 664638 41129064 ~ 41129320 (+)
XLOC_010170 NA non-coding downstream 678233 41142659 ~ 41148163 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000016_00513504_00514565 NA coding CI01000016 null 512124 ~ 514744 (-)