XLOC_010173 (BX005012.4)


Basic Information

Item Value
gene id XLOC_010173
gene name BX005012.4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 41465511 ~ 41473318 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020164
CTCTTTCGGCGGGTACGCGGACTTTGAGGGGAGGAACTACAGATTACGGAGATAACGAGGAAGCAaattccaaagctgaggagcTGAGTGGCTGAAGGCTCTGCTCCCAATGGTGACAAAGCGGACATAGGGAACAGTGAGGTTAATTGAAGAAAAGGAGTGTCTGAGAAGGTGTGGCGATATGAACAAGACTATTAAGTGTAGGCCAGCACTTAATTCCGACTCTCTGGTGGAGACTTGTTGCCAGAAGGATGAGGAGCAGAAGTGTGAAGAGGAAGGCTGTGCAACTCACAAACTCAAAGAAGTAAAGCGGTCCACAAGACGCACAGTGGGACACGACCTCCTCCATCACGAAAGCCACAAACGACAGCAGCTGAGGGGACACAAATGAAATGTAAGTGCATCAAGTAGCCACCAGTAGGCAGCAGCAGATTATTTACTTGGGGTAACTCAAGGTAAATGGAAAGGTTTGGTCAAATTGCTctcaaaattaaaacaattgtCTTTAACCTGATGGAAGCTACTTTAACACATGGCACTGTAGGCAGATTcactgatttgtttttgttttgttttatttttgagctTTTCATAAAGAAACAtctaaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097237

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020164 True 609 lncRNA 0.44 3 41465511 41473318

Neighbor

gene id symbol gene type direction distance location
XLOC_010172 nek11 coding upstream 168682 41171949 ~ 41296829 (+)
XLOC_010171 sc:d156 coding upstream 295922 41162854 ~ 41169589 (+)
XLOC_010170 NA coding upstream 317348 41142659 ~ 41148163 (+)
XLOC_010169 si:ch211-53m15.2 coding upstream 329372 41135018 ~ 41136139 (+)
XLOC_010168 NA coding upstream 336191 41129064 ~ 41129320 (+)
XLOC_010174 si:dkey-11p23.7 coding downstream 43870 41517188 ~ 41521289 (+)
XLOC_010175 BX005012.2 coding downstream 73445 41546763 ~ 41548437 (+)
XLOC_010176 aste1a coding downstream 97335 41570653 ~ 41579815 (+)
XLOC_010177 ubxn11 coding downstream 195156 41668474 ~ 41681746 (+)
XLOC_010178 mtdhb coding downstream 243995 41717313 ~ 41732459 (+)
XLOC_010166 NA non-coding upstream 410859 41036647 ~ 41054652 (+)
XLOC_010163 NA non-coding upstream 519754 40941737 ~ 40945757 (+)
XLOC_010162 NA non-coding upstream 571993 40873241 ~ 40893518 (+)
XLOC_010183 BX649388.2 non-coding downstream 593264 42066582 ~ 42073705 (+)
XLOC_010184 NA non-coding downstream 616988 42090306 ~ 42096260 (+)
XLOC_010186 NA non-coding downstream 863927 42337245 ~ 42337549 (+)
XLOC_010187 NA non-coding downstream 990691 42464009 ~ 42470156 (+)

Expression


Co-expression Network