XLOC_010176 (aste1a)


Basic Information

Item Value
gene id XLOC_010176
gene name aste1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 41570653 ~ 41579815 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020167
CCTCACCTACATTCATCTTCCCGTCTACTCAATGACACATCTGCAGTGAGTGACACAACCTTTATCAACATGGGAGTCCAAGGACTGAAGACCTACATTGAAAGCAGCAGCAGGAATGATTTAAAGACCTGGGCTTTTAGAGACAAACAACTAATTATTGATGGATGCAATTTATTTTACTCACTGTGTTTTGACTCCAATCTGGATCAGATTCACGGAGGAGACTATGATACCTTTGAGAAAGTGGTCAGACAGTTCTTCGAGAACCTTTCAGCATGTGATGTTCACCCTTACGTTGTGATTGATGGCGGGGATGACCACACTGACAAAAAATGGGACACCCTCCTGACACgaaaacagaagaaaataaagGATGCCTATGACCTGTCTGTGGGGAAGAGACGGCAAGTCCTTCCTCTCCTTACTGAAAAGGTGTTCAAACAAGTCCTCAAGAAGCTCAAGGTACCGGTGGTGCAGACTCTCGAAGAGGCCGATTGGGAAATTGCAGCGTTGGCAGAAGAATGGAATTGTCCAGTTTTGTCCAACGACAGTGACTTCTACATATTCAACCTCAGGGCAGGACTCCTGCCAATCACACATTTCCACTGGAGAAAAGTGAGAGTGAAcagaaaaacaaaccaaaaatttaTCTTAAGCAAGCACTTCATCGCACGGAAATTCTGCAAATCCTTCAAAATGAACGTCAGCCTTCTTCCGGTCTTTGCTTCCATCTTGGGCAACGATTATGTGAAGCTCCCAAATATCAAGAACCGGCATTGGGAGAGGTACTCGAATCCTGGCTCAGAGAATCCCCAAATTGAAGGGCTACTTAACTGGTTGTCCCAGTTTTCAGGGCCAGACGAAGCTATAAGCGCTTTGCTGAGGCCAACAAGTAACAAAACCAAAGCCCAGGAAGAACTTTCCCACGGAATACAAGATTACAAGCTCGTCCCTGGTTCTCTTGCCCAAATATTTCGCTCAACTAAGGTTCCACAAAAAATCTCCAAAGGTCCTCTACACGTTCTGCCTAGATGGACTTTGAGACCCATACTTGATGGAAAGATGAGCTCCTACATTATCAATGTACTGCTACATAATAGAGCTTCCTTGAATGCCCAAGTTGAAGATTTCCAACTCCCAAGTGCCAATGAAACTTCTCTTCACATACGCCAAGTGTTTTACGGATTACTGCTGTTGGGGGAACAACAGACAGCAGGTAAACGAGAGTCAGTCAAGGGTACAACCAAACGCTATGTTGTTGAATATAGCAGACAGCAAATAAAACGAAGCAGTGAGAACGTCGAAGCCATACAGACGAAGGCGATGGAAGGACTTCGACTGGAAACATTGTACCAGGAGCCACATGCGGTGCGACTTCAGGTGATCCTGGACACTTTGGGCGTTTCGTGCGAGATGCTAAAAGGGACCCCAGATGCTCTACAGCTGCAGATGTTTGTGACGAGGTACTGGCTGGTAAACGCAGAGCCACAGCCGTGCCGAGTGCATCTTTGGGGGCTGCTACTGGGAATGGTTTATGGAAAGCTCAGCAGTTCACCTAATGCACAAAAAGACATGCTGTCGAGACTGAGAGTAAAAGCTAGCCGAAAAGGAGGCTCTGTGGATATTGATGTCGCTCATGCTTACAGCCAGTGGCAGTCCTGTCTGAAGTACAGCCTCAATCTCAACTATCTGCTGTCTTTTCCACTCACTGAACCAGACTGCGCAAGTCTGTACCGTGGCTCCCTGGTGCATCAGGCTGTAGGAGAGCTCAGGAGAGGCATCAGTCTGGAGGCTCTGCTGGTCAAGGGTTCCAGTGCTGAGCGCATCTTCAAACAGCTCAAGGACATCATCGTGAGCTTAATGGGAGACGACTTCATCAAGAAAATGAAGAGCGGACTGGAACACAGAGATGCTGGAAAAACACAGAGAGCCTCCAAAGGCCAGAAGGATGAGCTGGACATTTACTTTGAACAAATGATGATCGAGAGCATCGACAGTGAAGATGAGGAGCTTTTAGATGTGAGGAAGAGCAAGGCCAAGAATCACCTGATGGAGTTGCCAGTGTGCCCGATCCGTGCCAGACACAAGGCTAAAGCTCGCAATGCTCGTCATCCCTGCAAGAAATATGAGAGAAGATGCTTTGAGTAGACCTTGAAAAAACAATCAGGAAAATTGTTAGTTTCACTATTGCACTTACAACAAACATGGAGGCATTAAACCAGGAAACATGGTGAAGTGATAATTCTATAATATTAGAATCACGTCAGGGATGATCATGTTTTCTAGGCATATGTCAGAAGCAGATTTATTTTTGCTGAAGCTTTTCTTgtgatatacactacctgacaaaagcctatctaagttttaggaacaacagataataagttgacttctagttgatcatttggtgtcagagaagtggcttaaatgaaaggcaaagacctctagattatgcttattctaccaaaataaaatatgaacaagccttgattttaaattgtttaattaggacagtaatgtctgactttgataagacaaaagtcttgtcacttaacagaaataatgtacagtatagaatataaagtcacggtgcagtggaaaaataattgtgtatgacttccataAGCTttgacgactgcatccatacatctctgcactgacacaaatcacttattaataaagtcatctggaatggccaagaaagcgtt

Function

symbol description
aste1a Orthologous to human ASTE1 (asteroid homolog 1).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-520 Orthologous to human ASTE1 (asteroid homolog 1).

Ensembl:

ensembl_id ENSDARG00000070132

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020167 True 2708 mRNA 0.44 5 41570653 41579815

Neighbor

gene id symbol gene type direction distance location
XLOC_010175 BX005012.2 coding upstream 22216 41546763 ~ 41548437 (+)
XLOC_010174 si:dkey-11p23.7 coding upstream 49364 41517188 ~ 41521289 (+)
XLOC_010173 BX005012.4 coding upstream 97335 41465511 ~ 41473318 (+)
XLOC_010172 nek11 coding upstream 273824 41171949 ~ 41296829 (+)
XLOC_010171 sc:d156 coding upstream 401064 41162854 ~ 41169589 (+)
XLOC_010177 ubxn11 coding downstream 88659 41668474 ~ 41681746 (+)
XLOC_010178 mtdhb coding downstream 137498 41717313 ~ 41732459 (+)
XLOC_010179 si:dkey-199f5.6 coding downstream 246769 41826584 ~ 41839073 (+)
XLOC_010180 scn1ba coding downstream 293893 41873708 ~ 41897745 (+)
XLOC_010181 si:ch211-225p5.8 coding downstream 394623 41974438 ~ 41984133 (+)
XLOC_010170 NA non-coding upstream 422490 41142659 ~ 41148163 (+)
XLOC_010168 NA non-coding upstream 441333 41129064 ~ 41129320 (+)
XLOC_010166 NA non-coding upstream 516001 41036647 ~ 41054652 (+)
XLOC_010183 BX649388.2 non-coding downstream 486767 42066582 ~ 42073705 (+)
XLOC_010184 NA non-coding downstream 510491 42090306 ~ 42096260 (+)
XLOC_010186 NA non-coding downstream 757430 42337245 ~ 42337549 (+)
XLOC_010187 NA non-coding downstream 884194 42464009 ~ 42470156 (+)
XLOC_010191 NA non-coding downstream 940891 42520706 ~ 42521936 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000027_03969492_03973741 NA coding CI01000027 null 3968698 ~ 3974176 (-)