XLOC_010186



Basic Information


Item Value
gene id XLOC_010186
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 42337245 ~ 42337549 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021748
CAAAACTCACATTCTAAAACTTACTTTGTCaaaaataattgttaataaacaaacaataaaaccattaaaagagTAGCAACGTGATATCTTCAGTCAGTTTCATCTAACTGAAGCATTCAAGCTGTAATTAatccaactatatatatatatatatatgtatgtattaatacatacagtatacaaatcAAAATTATTGTGAGTTTTTGTGACTGAAACTATTCACCAGCTCACCTGTACTGACCCAAATAAGCCTGAAGgtctaaaataaacatgaataaatatgtaaaaataaatgaatatataaa

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021748 True 305 lncRNA 0.26 1 42337245 42337549

Neighbor


gene id symbol gene type direction distance location
XLOC_010185 CU104741.1 coding upstream 28565 42270499 ~ 42308680 (+)
XLOC_010184 NA coding upstream 240985 42090306 ~ 42096260 (+)
XLOC_010183 BX649388.2 coding upstream 263540 42066582 ~ 42073705 (+)
XLOC_010182 fli1b coding upstream 290364 42018041 ~ 42046881 (+)
XLOC_010181 si:ch211-225p5.8 coding upstream 353112 41974438 ~ 41984133 (+)
XLOC_010187 NA coding downstream 126460 42464009 ~ 42470156 (+)
XLOC_010188 pkdc coding downstream 133906 42471455 ~ 42472987 (+)
XLOC_010189 si:ch211-135n15.1 coding downstream 139606 42477155 ~ 42477952 (+)
XLOC_010190 herpud2 coding downstream 143898 42481447 ~ 42495383 (+)
XLOC_010191 NA coding downstream 183157 42520706 ~ 42521936 (+)
XLOC_010175 BX005012.2 non-coding upstream 788808 41546763 ~ 41548437 (+)
XLOC_010173 BX005012.4 non-coding upstream 863927 41465511 ~ 41473318 (+)
XLOC_010170 NA non-coding upstream 1189082 41142659 ~ 41148163 (+)
XLOC_010193 NA non-coding downstream 353510 42691059 ~ 42693663 (+)
XLOC_010194 NA non-coding downstream 435119 42772668 ~ 42781775 (+)
XLOC_010195 NA non-coding downstream 458055 42795604 ~ 42800731 (+)

Expression



Co-expression Network