CI01000059_10279018_10279718


Basic Information

Item Value
gene id CI01000059_10279018_10279718
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 10278765 ~ 10279718 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000059_10279018_10279718.mRNA
ATGACCTCAGTCAGTCACCGGCTCTTCACCGCCTGGAAGCTGAGGCGAACTCTGACCTCTGGACACTTACTTTCTCCTCAGAGACACTGGACATTCACAGGATGGCCGTTTGTTTTGGCTGCTGGTAAGAAATACCAGATTGACCTGCCAGTTGTACATGAGGAAGAGCTTGAGGAGCAGTTTGTTCGGGGATCTGGACCTGGAGGACAAGCCACCAACAAAACCAGCAACTGCGTCGTGCTGAAACACATTCCCACAGGGATCGTCGTGAAGTGTCACGAGACCAGATCGGTGGATCTGAACAGAAAACGAGCGCGAGAGATTTTACGTGAGAAACTGGACGTCTTCAAGGGTGAAGAAAGTGAACTGCTGAAGATGAAAAGAGAATCCATACAAAGAAAGCAGGACAAACGGAGGAAAGTGAATGAAAACATGGAGAAAAAAAGACGATTCAAGGAGAGGCTCTGCTCCGAAGAAGAAGAAGAGAAACACTGAGATTCATTCATTACAGAAGATGAGCTGCACATGATTCAACCTTTGTTTTCTTTTTAACACTTTAACAGTGTAATCTGTACATTGAGAAACGGGCTTTTATCCTGATTCGGGAGCTGATCCAGCGCTGGACTAAACTATATCAACTAAACTAGTGGAAATGTTTCAGCTCGTGAGAGAATTAATCTTTTGTCCCTGTTCAGTTTCTGTCAGACAGCAGCTTGAGTACACAACATCTGTCAAACTGGTTAATAAA

Function

GO:

id name namespace
GO:0006415 translational termination biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000059_10279018_10279718.mRNA True 748 mRNA 0.45 2 10278765 10279718

Neighbor

gene id symbol gene type direction distance location
CI01000059_10273383_10276157 NA coding downstream 2608 10272618 ~ 10276157 (-)
CI01000059_10234027_10257208 FSD1L coding downstream 21557 10233158 ~ 10257208 (-)
CI01000059_10226065_10230940 FKTN coding downstream 47825 10225846 ~ 10230940 (-)
CI01000059_10112766_10123616 DNAJC25 coding downstream 155149 10112310 ~ 10123616 (-)
CI01000059_10078245_10087217 NA coding downstream 191548 10078202 ~ 10087217 (-)
CI01000059_10280772_10283135 NA coding upstream 936 10280654 ~ 10283135 (-)
CI01000059_10285427_10291570 MTHFD2.L, MTHFD2, MTHFD2L.S coding upstream 5436 10285154 ~ 10291570 (-)
CI01000059_10303206_10307419 NA coding upstream 23332 10303050 ~ 10307419 (-)
CI01000059_10317739_10326067 VPS33A coding upstream 37598 10317316 ~ 10326067 (-)
CI01000059_10349625_10350282 NA coding upstream 69461 10349179 ~ 10350282 (-)
G257073 NA non-coding downstream 71064 10206848 ~ 10207701 (-)
G257063 NA non-coding downstream 74228 10116365 ~ 10204537 (-)
G257085 NA non-coding downstream 75298 10202414 ~ 10203467 (-)
G257299 NA non-coding downstream 180850 10097716 ~ 10097915 (-)
G257282 NA non-coding downstream 267959 10010080 ~ 10010806 (-)
G257014 NA other downstream 679757 9454216 ~ 9599008 (-)
G256890 NA other downstream 1296648 8981696 ~ 8982117 (-)
G255092 NA other downstream 4035973 6236106 ~ 6242792 (-)
G254203 NA other downstream 5040466 5237786 ~ 5238299 (-)
G253914 NA other downstream 5524683 4753538 ~ 4754082 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_030677 C5H12orf65 coding NC_007116.7 CM002889.2 69747417 ~ 69783881 (+)