XLOC_010189 (si:ch211-135n15.1)



Basic Information


Item Value
gene id XLOC_010189
gene name si:ch211-135n15.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 42477155 ~ 42477952 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00020188
TCCTGAGGTTGTATGCTCAAACCTGACTGTTCTGAAGCTGCGCCATGTTCCTGTGAAACCTGCTGAGAAGCAGAAGTTCACTGATGGTCATGGACTGCCAAAACGTTGCGGAGTGAGGTCTCTTAAGCATATGATGGAGGTTTCACTGGAAGACATCAGCTATCTTTCATGTGAGCCTGACCTGAGTGCCAGCGTTGACCATTCCCCATCTTTTCTGCCCCATTATGAGAGTCCAGAAGTGAGAATGGATAAACGTAGGCCTCTCCGTCATCATCCTGCTCCACGCTCAAAACTGCCAGTTCTGAAATCAAAGCATGTTCCTGTGAAGCCTGTCAACCAGCAGAGTTTCACAGATGAACCTTCAGAATGGCTGGGTGTGGACTCAAATCATATGATTGAAGGGACCCAATCAGTGAGAAGGGACAAGCGTAGGTTTCTCCGTCATCATCCTGCTCCACGCTCAAAACTGCCAGTTCTGAAGTCAAAGCATGTTCCTGTGAAGCCTGTCAACCAGCAGAGTTTCACAGATGAACCCGCAGAATGGCTGGACGTGGGGTCGAATCATATGATGAAAGGGTGCCAACCTGTGAGGATGGACAAGCGTAGGCCTCTCCCCAAACATCCTGTTGCTGGACGCTCAAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000088867

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00020188 True 642 mRNA 0.50 3 42477155 42477952

Neighbor


gene id symbol gene type direction distance location
XLOC_010188 pkdc coding upstream 4168 42471455 ~ 42472987 (+)
XLOC_010187 NA coding upstream 6999 42464009 ~ 42470156 (+)
XLOC_010186 NA coding upstream 139606 42337245 ~ 42337549 (+)
XLOC_010185 CU104741.1 coding upstream 168475 42270499 ~ 42308680 (+)
XLOC_010184 NA coding upstream 380895 42090306 ~ 42096260 (+)
XLOC_010190 herpud2 coding downstream 3495 42481447 ~ 42495383 (+)
XLOC_010191 NA coding downstream 42754 42520706 ~ 42521936 (+)
XLOC_010192 dpy19l1l coding downstream 189608 42667560 ~ 42683501 (+)
XLOC_010193 NA coding downstream 213107 42691059 ~ 42693663 (+)
XLOC_010194 NA coding downstream 294716 42772668 ~ 42781775 (+)
XLOC_010183 BX649388.2 non-coding upstream 403450 42066582 ~ 42073705 (+)
XLOC_010175 BX005012.2 non-coding upstream 928718 41546763 ~ 41548437 (+)
XLOC_010195 NA non-coding downstream 317652 42795604 ~ 42800731 (+)
XLOC_010197 CR854827.2 non-coding downstream 398494 42876446 ~ 42878011 (+)

Expression



Co-expression Network