XLOC_010212 (zgc:101716)


Basic Information

Item Value
gene id XLOC_010212
gene name zgc:101716
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 44678302 ~ 44687969 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020215
CTGGTGGAAGCATCTTACATTTTGAATTACGACATTTAAACTAAAGGACTGCGTTAATGTGTTTCCATCGGTTGCCTTGATGTTTCTGTAACCTCTGCTTTGTAACGGTGTACCACTTACACTGTGTATGTTCATGGCACGAGTGTGTGGGAGTCCACAGTGACGCGTGTTTTCATGATGGAGATTCTGGGCAGCACGTTTGATGATTCGGTGTTTGAAGAGTCGCGGGACAGAAGAGTCTCCACTGCTCTGCCCACATACCAGCCCAAAATCTGCGAGCCTTTGTGGTTTTGTGAAGATGGAAATGAAGAGGAATCACTAGAAGAGCAAAAAACCTTGAAGTTTCGAGGAGATTTGGCCTACAGGAGGAAACAGTACCAGATCGCTCTGGATGATTATGCATCCTGTCTCTCTCTCGTACCTGCTGGAAACACATCAGTGAAGAGAGACGTGCTGGAGGGAATCGCACGATGCTGCTGTCATCTGGGCAAAAAAGACGAGGCTCTTAATGCCTGTGAGAAACTGAGGACAGACGTATCGAACACCTGCCACCTCACCTGCGTCCTGCAGCTGGAGCTCAGTGTTCATGAGCATTACAGAGATCTGACCAGCAGCATCTCCAGCCTCCAGCAGCTCTGTTGTCTTCATCCGTATCATCCGTGGCACTGGCTGAATCTGGCCACCAGCTTTCAGAGACTACTGGAGTCTGACAACCATCCAGAGACATCCAGTGCTGAGGAGAAACCTGAAAAACAGCAAGAGACCAAGAACATTTTAAGACTGAAGACCATCATGGGCTTAATTAGAACGAGGATGCTGATTGAAATCCTCCGGGTTCAGCAGTTCTCATTTGTGCTGGAAAACAGCCTGAGAGCTTTACAAGACATTGAGGAAGCTCTACACGTCTTGCAGCCAACAGAGAAGATACTTCAGATGGTCTCTGAGGTGATGGCAGAAGACCTCAATCCAGAGAAGATGAGGGAGGAAACCCAAGATGGAGAGAGTTTATCAGGTCTCTGTGTTAAAGACTTTGATGAGAGATGGTGGAACAAACTCCACAGCAAACTGCAGGAGGACACGACAGCTTTACCATTTCACACAAACCTGCAGGAGATATATCAGTAATACAAACATTTTGCCCTTAAAAATGGATGTGTATCTTATACTTAAATAACATGAATTATACTGTTACAAAGCAGAATAAAGTCGaatgtttcaaaataaataaagctgctACTGACTCAAACATCA
>TCONS_00020216
tgaaaaaatctccgttaaacagaatttgaggatatacaggcgggctaataattctgacttcaactgtacatacagcaTGTTTAAATCAATCAATGAAAATAAACTATGTTTTTTGGCCAGAGGACAGACGTATCGAACACCTGCCACCTCACCTGCGTCCTGCAGCTGGAGCTCAGTGTTCATGAGCATTACAGAGATCTGACCAGCAGCATCTCCAGCCTCCAGCAGCTCTGTTGTCTTCATCCGTATCATCCGTGGCACTGGCTGAATCTGGCCACCAGCTTTCAGAGACTACTGGAGTCTGACAACCATCCAGAGACATCCAGTGCTGAGGAGAAACCTGAAAAACAGCAAGAGACCAAGAACATTTTAAGACTGAAGACCATCATGGGCTTAATTAGAACGAGGATGCTGATTGAAATCCTCCGGGTTCAGCAGTTCTCATTTGTGCTGGAAAACAGCCTGAGAGCTTTACAAGACATTGAGGAAGCTCTACACGTCTTGCAGCCAACAGAGAAGATACTTCAGATGGTCTCTGAGGTGATGGCAGAAGACCTCAATCCAGAGAAGATGAGGGAGGAAACCCAAGATGGAGAGAGTTTATCAGGTCTCTGTGTTAAAGACTTTGATGAGAGATGGTGGAACAAACTCCACAGCAAACTGCAGGAGGACACGACAGCTTTACCATTTCACACAAACCTGCAGGAGATATATCAGTAATACAAACATTTTGCCCTTAAAAATGGATGTGTATCTTATACTTAAATAACATGAATTATACTGTTACAAAGCAGAATAAAGTCGaatgtttc

Function

symbol description
zgc:101716 Orthologous to human C8orf76 (chromosome 8 open reading frame 76).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-041114-135 Orthologous to human C8orf76 (chromosome 8 open reading frame 76).

Ensembl:

ensembl_id ENSDARG00000010738

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020215 False 1251 mRNA 0.45 6 44678302 44687969
TCONS_00020216 True 812 processed_transcript 0.43 3 44683065 44687935

Neighbor

gene id symbol gene type direction distance location
XLOC_010211 CR925804.2 coding upstream 72862 44605326 ~ 44605440 (+)
XLOC_010210 dpys coding upstream 352614 44298902 ~ 44325688 (+)
XLOC_010209 NA coding upstream 859737 43765979 ~ 43818565 (+)
XLOC_010208 NA coding upstream 990734 43687153 ~ 43687568 (+)
XLOC_010207 sqlea coding upstream 1265009 43401005 ~ 43413293 (+)
XLOC_010213 CR925804.1 coding downstream 16403 44704372 ~ 44705154 (+)
XLOC_010214 upk1a coding downstream 80392 44768361 ~ 44780744 (+)
XLOC_010215 cd22 coding downstream 218355 44906324 ~ 44917748 (+)
XLOC_010216 FP085399.1 coding downstream 515121 45203090 ~ 45206236 (+)
XLOC_010217 FP016247.1 coding downstream 529338 45217307 ~ 45273719 (+)
XLOC_010201 NA non-coding upstream 1554066 43119050 ~ 43124236 (+)
XLOC_010199 NA non-coding upstream 1630023 43041505 ~ 43048279 (+)
XLOC_010220 NA non-coding downstream 768011 45455980 ~ 45691220 (+)
XLOC_010221 CU062666.1 non-coding downstream 900245 45588214 ~ 45588330 (+)

Expression


Co-expression Network