XLOC_010216 (FP085399.1)



Basic Information


Item Value
gene id XLOC_010216
gene name FP085399.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 45203090 ~ 45206236 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00020220
GCAAACACAGAGTGAAAACAGAAAACCATCATCCTATCAGGTTCCTCGTCTTAAAGAGAAATGATTCCTCTGATAAACCAGCACATGTGATGAAAGAAGGCGGGACCGTCTCCTCTGATTGGTTCAGGGATCATGGAGAGTAAATACGCCCAGGGGAGAATAAATGACTCATCCTGGAaacggtgtgtgtgtggtgttgtggAGACCAGACATACGGGCCCACCGCGACACACACACAGGGCACTGGCACAGCAATAATGAGCAGATGGGGTTCATACGTGCAGCGCACGGCCATCAGACAACATGAATTGTGACAGGTTTTGTAAGGGAAATGCTGATTTACTGTATATTATCAGCTTCATGTTGCTGCACTGTAaacttatttgtaaata

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100902

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00020220 True 392 lncRNA 0.46 2 45203090 45206236

Neighbor


gene id symbol gene type direction distance location
XLOC_010215 cd22 coding upstream 285342 44906324 ~ 44917748 (+)
XLOC_010214 upk1a coding upstream 422346 44768361 ~ 44780744 (+)
XLOC_010213 CR925804.1 coding upstream 497936 44704372 ~ 44705154 (+)
XLOC_010212 zgc:101716 coding upstream 515121 44678302 ~ 44687969 (+)
XLOC_010211 CR925804.2 coding upstream 597650 44605326 ~ 44605440 (+)
XLOC_010217 FP016247.1 coding downstream 11071 45217307 ~ 45273719 (+)
XLOC_010218 dnase2 coding downstream 131427 45337663 ~ 45357518 (+)
XLOC_010219 phf1 coding downstream 218671 45424907 ~ 45443805 (+)
XLOC_010220 NA coding downstream 249744 45455980 ~ 45691220 (+)
XLOC_010221 CU062666.1 coding downstream 381978 45588214 ~ 45588330 (+)
XLOC_010209 NA non-coding upstream 1384525 43765979 ~ 43818565 (+)
XLOC_010208 NA non-coding upstream 1515522 43687153 ~ 43687568 (+)
XLOC_010201 NA non-coding upstream 2078854 43119050 ~ 43124236 (+)
XLOC_010222 CU459129.1 non-coding downstream 460499 45666735 ~ 45666852 (+)
XLOC_010225 NA non-coding downstream 580806 45787042 ~ 45812324 (+)

Expression



Co-expression Network