XLOC_001030 (C1H7orf26)


Basic Information

Item Value
gene id XLOC_001030
gene name C1H7orf26
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 9873295 ~ 9885326 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001647
TATTTTCCGAGGAACAACTTTCACATTGTCAGTTATGAGCGATATGCTTTTGCAGATTAAAGTAAACTAATGTAGCGAGTCTTAATTGTTAACCTAGttgGACTGATGCTTGTATATGTGCTGATGCTGTAGTTCCTCCTCCACAGCAGAGATGAGTGATATTCGGCATGCATTGCTGCGGCGCGATCCGCTGAGCGCTGCTAAAGAGGTTTTGTATCATCTGGACATCTCGCTGGGCAGTGCTCTGCAGAGCTCCGCTGGACCCCCGGCTGGACTAGAGAAGAGCACAGTGGAGCTGGTGGAAGAGTTCATCTTTCATGTCTCTAAAgacagaaacattcagtcaaaGAGGATGAGCTGCGTTCAAGAGCTGCAGCTGCTGGAGATCATATGCAGTTACTTCCAGGAGCAGAGCAAAGACGCCATCCGACAGGTCATTTTCTCGGCGCTCTTCAGTCTGCAAGGCAACAAGGCTGATGAGAGCCGCATGGCTATGCTCGGGAAGCTGGTTTCTATGTCCATAGCTGTGTGTCGTGTGCCTATACTAGAGTGTGCAGCTATCTGGCTACAGcGCACACACTCTGCGTGGTGTGTGCGTTTGGCACAGGTGTTGATGGAGGATTACTGCACGCTGGTGCCCTGTGCCATCTCTACCCTACAAAACATCTGTTCAGCCAGCCCTCGCTTCTGCTGCCAGCTCATCACTGCAGTCACGGCGCTCTATGACTTCTCCACAGATGAGTTGACTCCACCCCCTGCGCTCCTGGAAATGCTGGTTGGTTGGATCACAGAGGATCCCAGACTTCTTTTGCTCACCTTCATCAACAGCCCACTCAATTCCAGCCTGCCGTTGGGTTGTCTCGAGATCACTCCTCTTCTGGGTTTGCTGCGGTGGTGTGTCAAAGCTCCGTTAGCCTATCACAGAGGCCGGAAGTCAGCTATGACCAATGGCCATGGAGATGGTGAAAAGGGGACGGCGTATGAAGAGCTTTACTCCAAATTACACCTGAGTGTTCTTCAAGTCTTTCTCATGCTTCAGGTGCACCTGACCGAGAAGAATATGTTTTGTCGTCTGACTGTTCTTCCTGTGGAGTCTGTAGCCGCTCTGATCGAGGAGGTCGGTCGTTTGTGTGAAAAGCTCGCGCCGCTTCTCGACGCCAGTCACATTCAGCTGGCTCTGGACAGGCTGGCACAGGCTCTACAGGTCGCCATGGCAACCGGAGCCCTTCTCTGCGCCAGAGAGGATCTACGGGCTTTGTGCTCCAGACTGCCTCACAACAATCTCTTACAGCTTGTAATGTCCGGGCCAGTGGTTCAACCTCCTCCTCACAGCTCCCCCTTCCAGCCCAACATGTACCCTCACAGCCCTCACACTGTCCTGACAGCCCACCCCACACACCCTGCACTCGCCCCTCACCGCCCGCTGACGGCCCACGCCACACACCCGGCCCTCTCTCCACACGCCTTCCACCCCGCCTCCATCGCCTTCCCCTACCGGCCCATACGCTGAGCGGGACGTCCCGACTACTGGACTTCTGTTCATGAGGTTTGAATTGATGTTGTTATAATGTTTGGTTTAGTCATATTATATGCGGGGATGTACAAATGTTTGGGAAGATAATCTGCTGGTCAAGGCTGCGTTTGTTTGATTTAAGAGAgttaaaaattgtgaaataatattacaatttaaaataaatgtttttttatagaattgaggtttaaatgt
>TCONS_00001648
CCGAGGAACAACTTTCACATTGTCAGTTATGAGCGATATGCTTTTGCAGATTAAAGTAAACTAATGTAGCGAGTCTTAATTGTTAACCTAGttgGACTGATGCTTGTATATGTGCTGATGCTGTAGTTCCTCCTCCACAGCAGAGATGAGTGATATTCGGCATGCATTGCTGCGGCGCGATCCGCTGAGCGCTGCTAAAGAGGTTTTGTATCATCTGGACATCTCGCTGGGCAGTGCTCTGCAGAGCTCCGCTGGACCCCCGGCTGGACTAGAGAAGAGCACAGTGGAGCTGGTGGAAGAGTTCATCTTTCATGTCTCTAAAgacagaaacattcagtcaaaGAGGATGAGCTGCGTTCAAGAGCTGCAGCTGCTGGAGATCATATGCAGTTACTTCCAGGAGCAGAGCAAAGACGCCATCCGACAGGTCATTTTCTCGGCGCTCTTCAGTCTGCAAGGCAACAAGGCTGATGAGAGCCGCATGGCTATGCTCGGGAAGCTGGTTTCTATGTCCATAGCTGTGTGTCGTGTGCCTATACTAGAGTGTGCAGCTATCTGGCTACAGcGCACACACTCTGCGTGGTGTGTGCGTTTGGCACAGGTGTTGATGGAGGATTACTGCACGCTGGTGCCCTGTGCCATCTCTACCCTACAAAACATCTGTTCAGCCAGCCCTCGCTTCTGCTGCCAGCTCATCACTGCAGTCACGGCGCTCTATGACTTCTCCACAGATGAGTTGACTCCACCCCCTGCGCTCCTGGAAATGCTGGTTGGTTGGATCACAGAGGATCCCAGACTTCTTTTGCTCACCTTCATCAACAGCCCACTCAATTCCAGCCTGCCGTTGGGTTGTCTCGAGATCACTCCTCTTCTGGGTTTGCTGCGGTGGTGTGTCAAAGCTCCGTTAGCCTATCACAGAGGCCGGAAGTCAGCTATGACCAATGGCCATGGAGATGGTGAAAAGGGGACGGCGTATGAAGAGCTTTACTCCAAATTACACCTGAGTGTTCTTCAAGTCTTTCTCATGCTTCAGGTGCACCTGACCGAGAAGAATATGTTTTGTCGTCTGACTGTTCTTCCTGTGGAGTCTGTAGCCGCTCTGATCGAGGAGGTCGGTCGTTTGTGTGAAAAGCTCGCGCCGCTTCTCGACGCCAGTCACATTCAGCTGGCTCTGGACAGGCTGGCACAGGCTCTACAGGTCGCCATGGCAACCGGAGCCCTTCTCTGCGCCAGAGAGGATCTACGGGCTTTGTGCTCCAGACTGCCTCACAACAATCTCTTACAGCTTGTAATGTCCGGGCCAGTGGTTCAACCTCCTCCTCACAGCTCCCCCTTCCAGCCCAACATGTACCCTCACATCCACCCAGGTCGCCCGTCTCCTCTGTCCCCCCACAGCCCACACCAGTCCACCTTGTCCTCCCCTCACAGCCCTCACACTGTCCTGACAGCCCACCCCACACACCCTGCACTCGCCCCTCACCGCCCGCTGACGGCCCACGCCACACACCCGGCCCTCTCTCCACACGCCTTCCACCCCGCCTCCATCGCCTTCCCCTACCGGCCCATACGCTGAGCGGGACGTCCCGACTACTGGACTTCTGTTCATGAGGTTTGAATTGATGTTGTTATAATGTTTGGTTTAGTCATATTATATGCGGGGATGTACAAATGTTTGGGAAGATAATCTGCTGGTCAAGGCTGCGTTTGTTTGATTTAAGAGAgttaaaaattgtgaaataatattacaatttaaaataaatgttttttta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000037652

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001647 False 1726 mRNA 0.51 9 9873295 9885326
TCONS_00001648 True 1769 mRNA 0.52 8 9873315 9885320

Neighbor

gene id symbol gene type direction distance location
XLOC_001029 mad1l1 coding downstream 14787 9739370 ~ 9858508 (-)
XLOC_001028 ugt5b2 coding downstream 220570 9629161 ~ 9652725 (-)
XLOC_001027 ugt5b5 coding downstream 243571 9626277 ~ 9629724 (-)
XLOC_001026 si:ch73-12o23.1 coding downstream 346095 9499645 ~ 9527200 (-)
XLOC_001025 micall2b coding downstream 387081 9459760 ~ 9486214 (-)
XLOC_001031 NA coding upstream 31050 9916376 ~ 9918812 (-)
XLOC_001032 pgap6 coding upstream 34583 9919909 ~ 9940494 (-)
XLOC_001033 si:dkeyp-75b4.7 coding upstream 87239 9972565 ~ 9980810 (-)
XLOC_001034 si:dkeyp-75b4.9 coding upstream 101349 9986675 ~ 9988840 (-)
XLOC_001035 rnf175 coding upstream 152118 10037444 ~ 10048514 (-)
XLOC_001024 NA non-coding downstream 451020 9420824 ~ 9422275 (-)
XLOC_001023 AL954703.1 non-coding downstream 551364 9308271 ~ 9321931 (-)
XLOC_001018 BX004779.1 non-coding downstream 675329 9197859 ~ 9197966 (-)
XLOC_001016 BX004779.2 non-coding downstream 710658 9157310 ~ 9162637 (-)
XLOC_001015 NA non-coding downstream 734135 9138638 ~ 9139160 (-)
XLOC_001037 CR854964.1 non-coding upstream 384921 10270247 ~ 10272725 (-)
XLOC_001044 NA non-coding upstream 786526 10671852 ~ 10682149 (-)
XLOC_001045 NA non-coding upstream 853839 10739165 ~ 10740441 (-)
XLOC_001049 BX323090.1 non-coding upstream 984791 10870117 ~ 10870241 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000300_01230946_01235589 CUNH7ORF26 coding CI01000300 null 1230696 ~ 1235589 (-)