CI01000063_06459591_06473697 (DUSP3, DUSP3A)


Basic Information

Item Value
gene id CI01000063_06459591_06473697
gene name DUSP3, DUSP3A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 6458650 ~ 6473952 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_06459591_06473697.mRNA
ATATAAAACCGACTTAATATGTGAACTTCACAAGGATCTCAGTTATCTGTGGCTATATAGGCCTATCAGGTATTCCCTTCGTTGTGTGGGGACAAAATGTCCCCACAAGGATGGCAATACCAGAAATGTTTGACCTTTTGGGAACATTTTATGTTCATACACAAATTATGCCACTTTATCAATATCCAGTTAACTTTCTTTCTATTGTAATACACTTTTGGCCCAGATAAAAACATGTTTTCCTTATGGGAGCACTTGTAATAGACTTCAGTGTCTGTCAAATTTGACATAATCAAGCAGGTAGATGAAGTTTTAGAGTGAAAATATGTGGGTTAAAAGCCACTTGTTGGATTAATAAAGGAGAGAGAGAAATAAATAAATAATCTTAATTACTTTTATTAAGCCTGCCTGTCACAACATCAATTAGCTAACACACAAATCTAGCCTCACATGAAGGGAGGGGTTAATGCTCAGTTATATTCTCGTGTTAATAGATCAATGGGCGGATTACTTGTAGAGAATAACCGTTAAGGACATTGTTTTACGCACAACAGGTGACATGAATGTGTAAAATGCTGTCTAACCTATCTGAACTGTAGATGGATTCGACGATTGAGTAGCGTCCCCTTTAACACTGCTCTCATTGACTCGTGTATCGGTGCGTTGTCGCCATCTTCCGCCAGTTCTGTTACCGACCTCACCGGAGCATCACATCAGACCGCCGGTGGGCGAGTCCGGGTGTGTCTGTCTGCCTGCGAGAGAGCGGCCGTGCGAGCGTGCGTTCAGGAAAGCTCGCAAATAACACCGAGAGGGGAGGGAAATAAAATGCTGGGGAATCGAAAGCGGTCACATCTTCATCACTAGACACTTGTTGTTTCTTTCTTTATTTTTTATTTTATTTTTATTTATTTATTTTTTTGCTTTTGGAGGAGGATAGAAGCATGAAGAAGCATCTCAGCCCCGCGAAGGTACCACTGGAAGTCACCGTACCAGACACCGAGGTGACTGTACAACAACTCAACAAGCTGCTGTCAAACGGCAGCGGTTTCTACAGCCTCCCAGCACAACATTTCAACGAGGTCTTTCCCAGGATTTACATCGGCAATGCTCTTTCATCTACTGCATTGTTAAGAGGGATTGTGCTGAGGAGTGGACGAGAGAGACATAAAGAGGCTGGATTTTTAGCAGACAAAGATGAAAGAGTTCCAGGTGCTAAAGCAAAATACAGACAATGCAACTACATTCCTATTTTGGGCACTACGCTGGACGCCTATGGCTCTTTGTATGCCTCTGGGCGGCAGCCAAGATCTCCTTGGTGTGTCTGTTCTGGTTTAGAACACGGCTGTCTCCAGGGGCCCTCTGACATCGGCCGACATCTCTGCCAACTAAAAGCGGCTCCACAATTCACTCCAATCAGTCTCAAACTAGACACAGAAAACCGTTCTGTAGTTGGGGCTTTTTGGGTGAGCTTCACACGTGCTTTGCTTCTGCTCCCCAGGTTTGTGGCCCAGAATGTGATGCGTCTGCAGCGGCTGGGTGTGACACACATACTGAATGTTGCAGAGGGAAACTCTTTTATGCATGTGAACACCAATGCAGAGTTCTACACAGGAACTGGGATCACATACCACGGCATACAGGCCAATGACACTGAGCAGTTCAACATCAGTGCCTTCTTTGAGGAAGCGGCAGACTTCATTGATAAGGCTATGGCACATGGAAAAGGAAAGGTTTATGTTCACTGCCGTGAGGGCTACAGCCGTTCGCCCACTATCGTCATCGCTTACCTCATGCTCCGTCACAAGATGGATGTACGAGTTGCCACAGCTACAGTAAGACACAAGAGAGAGATCGGCCCGAATGATGGATTCCTCTGCCAGCTATGCCAACTCAATGAAAAGCTGGCGAAGGAGGGCAAGTTGAAGACCAAATGATAGAATGTGCTCTACCCCCACGTATACTCTCAAATGCAGGCACACACAGTCAAACTAGTGTGCACAATATTTCCTGTCCAAGTATATTAACAGAATGTATACATACATCCAGAGCATATGCATGGAGGTATACAAAGTGTATTCAAACACACACACTCTCACATACACACTCACACGAGGTGTTGTCAGTATCCTGAATAATTACTCCTGCCTCCAGCTGGCTGGTAAAGGGAAATTTACTGGCATATCTGAATA

Function

symbol description
dusp3a Predicted to enable protein tyrosine phosphatase activity and protein tyrosine/serine/threonine phosphatase activity. Predicted to act upstream of or within protein dephosphorylation. Predicted to be located in cytoplasm. Orthologous to human DUSP3 (dual specificity phosphatase 3).
dusp3 Enables cytoskeletal protein binding activity; phosphoprotein phosphatase activity; and receptor tyrosine kinase binding activity. Involved in several processes, including cellular response to epidermal growth factor stimulus; negative regulation of signal transduction; and regulation of cell-substrate junction organization. Located in cytosol; immunological synapse; and nucleoplasm.

GO:

id name namespace
GO:0045931 positive regulation of mitotic cell cycle biological_process

KEGG:

id description
K17614 DUSP3, VHR; dual specificity phosphatase 3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_06459591_06473697.mRNA True 2189 mRNA 0.45 5 6458650 6473952

Neighbor

gene id symbol gene type direction distance location
CI01000063_06428760_06430410 ARL4D coding upstream 27867 6428444 ~ 6430783 (+)
CI01000063_06426638_06427824 NA coding upstream 30785 6426432 ~ 6427865 (+)
CI01000063_06420629_06423287 NA coding upstream 35250 6420471 ~ 6423400 (+)
CI01000063_06408168_06418415 NBR1 coding upstream 39551 6407762 ~ 6419326 (+)
CI01000063_06384263_06390553 NA coding upstream 68060 6384109 ~ 6390590 (+)
CI01000063_06491111_06495718 NA coding downstream 15778 6489730 ~ 6496295 (+)
CI01000063_06579194_06585204 MEOX1 coding downstream 104786 6578738 ~ 6585548 (+)
CI01000063_06641523_06649617 ETV4 coding downstream 167571 6641523 ~ 6649822 (+)
CI01000063_06663858_06707601 SPATA20 coding downstream 189906 6663858 ~ 6707704 (+)
CI01000063_06733190_06869248 CACNA1G coding downstream 259238 6733190 ~ 6869248 (+)
G265463 NA non-coding upstream 119783 6338652 ~ 6338867 (+)
G265460 NA non-coding upstream 135026 6323277 ~ 6323624 (+)
G265334 NA non-coding upstream 184767 6270464 ~ 6273883 (+)
G265457 NA non-coding upstream 199383 6259057 ~ 6259267 (+)
G266176 NA non-coding downstream 177865 6651817 ~ 6653969 (+)
G266294 NA non-coding downstream 547353 7021305 ~ 7021509 (+)
G266299 NA non-coding downstream 552095 7026047 ~ 7026289 (+)
CI01000063_07120937_07121851 CDK5R1B, CDK5R1 non-coding downstream 619325 7120602 ~ 7125013 (+)
G266208 NA non-coding downstream 641085 7115037 ~ 7117317 (+)
CI01000063_06335618_06338138 HOXB8B other upstream 121290 6335618 ~ 6338283 (+)
G265391 NA other upstream 539621 5913783 ~ 5919029 (+)
G262436 NA other upstream 3744133 2713615 ~ 2714517 (+)
G262423 NA other upstream 4215685 2241408 ~ 2242965 (+)
G262194 NA other upstream 5313643 1139352 ~ 1145007 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004768 dusp3a coding NC_007123.7 CM002896.2 27285994 ~ 27305823 (+)