XLOC_010438 (BX511173.1)


Basic Information

Item Value
gene id XLOC_010438
gene name BX511173.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 7693881 ~ 7696216 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020506
ACAGTCGATAACTATAAACATAGTTTGAGAGCAGTTAGTGTGTATGTTAGATAAAGGTGGTTTCAAAGCACctttatatattacaaataacAGCATGTTTAAACGCTTTTCGTTACAAACCAGCAGCCCGATGTCCGCAGAAGCTCAGCCGAGGGTGAGTGACTCTGCACGGGCAGCTGCAGGAAAGACCACCCGCTCAACAGGATTGGAGGCTTCTCCTACAGCAGCAGCTATGGAGAACAGCCCAACTGAGACGGGAAAGTCCATCTGTGCATTCTTCAACCGGACATGGAAGTCTTTTAAGGATCGTGTCCTCCTCTGGCGACGGGGCAACAAAGTGGGCCTAGATCC
>TCONS_00020507
GACGTACAGTCGATAACTATAAACATAGTTTGAGAGCAGTTAGTGTGTATGTTAGATAAAGGTGGTTTCAAAGCACctttatatattacaaataacAGCATGTTTAAACGCTTTTCGTTACAAACCAGCAGCCCGATGTCCGCAGAAGCTCAGCCGAGGGTGAGTGACTCTGCACGGGCAGCTGCAGGAAAGACCACCCGCTCAACAGGATTGGAGGCTTCTCCTACAGCAGCAGCTATGGAGAACAGCCCAACTGATAAACAAGCAAAAAGGTGGAAGAAAGGGATCCGTGCATTCTTTCGGCGAATAGGGAAGGGGCTCAAGCGTTGCACCCTCTGTTGGCCTGGAGAGAACATGTTGATCCCATTTCCATGCAGCGATCCCAATGAACCCCAGCCAGAATTATCTGGCCTCCAATGGGCATTATCAATCGATCCGTGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095842

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020506 False 351 processed_transcript 0.48 2 7693881 7696211
TCONS_00020507 True 441 processed_transcript 0.48 2 7694794 7696216

Neighbor

gene id symbol gene type direction distance location
XLOC_010437 pimr209 coding downstream 1313 7688368 ~ 7692568 (-)
XLOC_010436 NA coding downstream 72766 7508101 ~ 7621115 (-)
XLOC_010435 prdm1a coding downstream 250493 7430998 ~ 7443388 (-)
XLOC_010434 med18 coding downstream 314553 7376471 ~ 7379328 (-)
XLOC_010433 foxo6a coding downstream 331075 7315144 ~ 7362806 (-)
XLOC_010439 trim71 coding upstream 46442 7742658 ~ 7793457 (-)
XLOC_010440 tcaim coding upstream 106514 7802730 ~ 7828848 (-)
XLOC_010441 NA coding upstream 138003 7834219 ~ 7881277 (-)
XLOC_010442 CU856516.1 coding upstream 271804 7968020 ~ 7984901 (-)
XLOC_010443 snrka coding upstream 351680 8047896 ~ 8132742 (-)
XLOC_010626 CR392024.2 misc upstream 13198896 20895112 ~ 20895175 (-)
XLOC_010430 AL845419.1 non-coding downstream 864246 6828552 ~ 6829635 (-)
XLOC_010428 NA non-coding downstream 1042162 6648030 ~ 6651719 (-)
XLOC_010427 NA non-coding downstream 1058585 6605385 ~ 6635296 (-)
XLOC_010426 NA non-coding downstream 1102711 6588022 ~ 6591170 (-)
XLOC_010444 NA non-coding upstream 444496 8140712 ~ 8142312 (-)
XLOC_010447 CR478208.1 non-coding upstream 591555 8287771 ~ 8288447 (-)
XLOC_010450 CU062417.1 non-coding upstream 782664 8478880 ~ 8479009 (-)

Expression


Co-expression Network