XLOC_010447 (CR478208.1)


Basic Information

Item Value
gene id XLOC_010447
gene name CR478208.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 8287771 ~ 8288447 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020521
GAGATATTTTGACAGTGCAGATCACcttgtatatatattatactttgCGTTATAGCCACTgaaacttcaaaacatttagatATGGTCTTATAGCCCAGTCACAACGTGCAGCTACAGGTCCTCACTGAGCTCCTTTcagattccgtctggccctagccaTGACTTTCCCCAAACCAACAGCAGAGAGCTTTTGTTTTTCACCTGTTGAGTTGATTAAAACAGCAGTTCCAAATGAATCAGGGTAATTAGGAGGCTTTGAAACAGCTTGGACTATTTGTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104957

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020521 True 280 processed_transcript 0.41 2 8287771 8288447

Neighbor

gene id symbol gene type direction distance location
XLOC_010446 entpd3 coding downstream 6886 8258203 ~ 8280885 (-)
XLOC_010445 gask1a coding downstream 35786 8188188 ~ 8251985 (-)
XLOC_010444 NA coding downstream 145459 8140712 ~ 8142312 (-)
XLOC_010443 snrka coding downstream 155029 8047896 ~ 8132742 (-)
XLOC_010442 CU856516.1 coding downstream 302870 7968020 ~ 7984901 (-)
XLOC_010448 ddc coding upstream 10095 8298542 ~ 8342749 (-)
XLOC_010449 grb10b coding upstream 75638 8364085 ~ 8520474 (-)
XLOC_010450 CU062417.1 coding upstream 190433 8478880 ~ 8479009 (-)
XLOC_010451 cobl coding upstream 241325 8529772 ~ 8663552 (-)
XLOC_010452 NA coding upstream 380534 8668981 ~ 8679462 (-)
XLOC_010626 CR392024.2 misc upstream 12606665 20895112 ~ 20895175 (-)
XLOC_010441 NA non-coding downstream 406494 7834219 ~ 7881277 (-)
XLOC_010438 BX511173.1 non-coding downstream 591555 7693881 ~ 7696216 (-)
XLOC_010436 NA non-coding downstream 666656 7508101 ~ 7621115 (-)
XLOC_010455 CR394537.1 non-coding upstream 1013632 9302079 ~ 9302194 (-)
XLOC_010458 FO704756.1 non-coding upstream 1276056 9564503 ~ 9566371 (-)
XLOC_010461 NA non-coding upstream 1470729 9759176 ~ 9761753 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01096890_00003640_00004020 NA coding CI01096890 null 3640 ~ 4771 (+)