XLOC_010467 (cep76)


Basic Information

Item Value
gene id XLOC_010467
gene name cep76
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 10025896 ~ 10053049 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020552
GTCAGTTGAAGGAGGAGGCGTCTAGATAACACCCAGCATTAGAACAATAAGGATATGGTAGATCTCGTCATCAATCGTGGGCATCAAGCGTATTGTAATAGACTTGTAGTTTAGACTTAGGTGGCATTTTGACGATCGAAAACATGTCCTTGTCACCTGAAAAGGcaaatgagttaaaacaaataattcaTGACCATTTAATTAAGATGGATATCCATGGTAAAATTCGTGATGTTTTAACCGAAACAGTGCAAGGTGATGGCCACCATAAACAATGCTTGCTCTCTGAGGAGGACTTTATGCATGCACTCCAGCGGAGGGGAATTGTTAATGATGTGATGAAGGATCTTCACTTTACAAATATGTATAATTCTCATACTGAAGCTGATTCTGTGAACAAGTCTGCAACACATTTTATGGACCAGAACATCACACAGCTGAAAACAGCTAACATCGGTCAACTAAAGAGACAACTCTACCTTCAAGTTGTGGGTGGTAAAGCTTTTCTGGAACAGTTGCAGGAGCCAGAACCTTTACCTGGTCAGGTGTGCTCTACTTTCACACTTCACGTTCACTTCCGCAATCAGCGCTTCCGCTCCAAACCAATCCCATGTGCTTGTGAACCAGACATACAGGAAGGCTTTCTTCTGGAAATACACAGAGATGGCCCAGGAGATGCTAGCAAGATGGCTGATGCTACCACCATGTTGTCCATATGTGATCCAGTACATATGGTATTAATTAAAACAGACACCTCTGGGGACACAACACTGGTTTCTTCTTATTTTCTTGACTGGCGGACAGTTCTCAGTGCTCCCAATGGGAAAATCAGTGTCTCCGCAGAACTACTAGGAGTGGGTGCTGAAGCTAAAGTACCCGCTGGAGTTCTGAATCTAAAATTGGAACTGTACCCTCCCCTAACTGAGACCTTAAGCCCTGATGTCGTCACCATGCAGAAATCCTTGGAAAGACAAAAAACAGCAGAGAAGGAGAGATTGTTTTTGGTATATGCGAAACAGTGGTGGCAGGAGTTCTTGGACATTCGACCGTCAAACAAATCCAAACTCGTGAAGATTTTTGCACAGgatgaAAATGGTGTGAACAGACCTGTGTGTTCATATGTACGTGTATTGCGTGCTGGCAGATTGCTTGAAAGTCCACGGCAGGCGGCACGTTTCGTTAGTCTGTTAGCTCAGGAGAGAGCACCCGTGGTTGGAGGAGGAGTTAGGCAGGAGCAGTGGGCCTCCATGATGGTCTTTCTTTGTAGGAACAAGGGTGACTGTGAGGATCATGCTACACTACTGTGTAGTTTATTGTTGGGCTTTGGATTGGATGCTTATGTATGTGTTGGCACCAAAGTCAAAAATATTCCACACACATGGGTCATGACCTGTGGCACAGATGGCTCCATCACCTTTTGGGAAAGTTTTACTGCACACAGATACCTTCACCGTCCAATAGACCCAGATGCTCCTTCCATGATCCTCCAACCAAAACCTGTGCACCCTTACCAGAcacttggctgtgtatttaaccACAAGATATTTCTGGCAAACTGTCAGGTGTCAGATGCTGTGGAGCGGTGTGTATTTGACTTTACAGACGGCTCCCGCTGGAAGGCCATGAGTGAGGAGGCTGTTAGATCTGTATGTGACCCTGGCTTCAACGCCTCTCTCCctccaactcctcctctctgctcCTCTTCTTTAGTTCCAAATGAGGCTAGCAACCAACTTGAGCTGGAAATGCGGTACTTATTATCAGAGCATAGAAAGGATCTAGGTCTGGCAACGGTCTGGGATGATCACCTGTCATACCTGCTATCGGCTGCACTGTCAGCATATGAACTGGAGCGCTGTGCAGGTGTGTCATATGGAAATGAGGAGTTTCAGGATGCAGTAAGAAGAGCAGTGCCTGACGGACACACTTTTAAAGCCTTTCCTATCAATTTCTTGCACTGCAATGCACGCAGGGCATTTGCTACCTGCCTCAGGTCACCATTCTGTGAAGAAATTGTTTGCTGTCGAGGGGATCATGTACGACTAGCAGTGAGGGTTCGTGTGTTTGGATATCCAGAATCAGCTTGTGCTGTTTGGATCATGTTTGCTTGCAAATACAGATCAGTTCTGTAAAAAACGCAGCATGACTATTCAGATTCCATGTGTCTGCaactacatttaacatttatttgtgtCTAGTGTAATGCAAAcacacattttgtgtgtgtgtgtgtatgtatatatatatatatatatatatatatatatatatatatatatacacatgtatatatatatatatatatatatatatgtatgtatatatgtgtgtgtatatgtatgtatatatgtatgtatgtatgtatatagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaaaaagaaagaaagaaagaaagaaagaaagaaaagcttttttgctGTGCTATACATGACTACAGATGGAAAAATGAATGATCAAAAAAGACaagtgaataaaaatgtgtctttagtCGTGCAATGC

Function

symbol description
cep76 Predicted to be involved in regulation of centriole replication. Predicted to be located in centriole. Orthologous to human CEP76 (centrosomal protein 76).

GO:

id name namespace
GO:0046599 regulation of centriole replication biological_process
GO:0005814 centriole cellular_component
GO:0005856 cytoskeleton cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003674 molecular_function molecular_function

KEGG:

id description
ko03036 Chromosome and associated proteins

ZFIN:

id description
ZDB-GENE-070820-5 Predicted to be involved in regulation of centriole replication. Predicted to be located in centriole. Orthologous to human CEP76 (centrosomal protein 76).

Ensembl:

ensembl_id ENSDARG00000058319

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020552 True 2533 mRNA 0.42 12 10025896 10053049

Neighbor

gene id symbol gene type direction distance location
XLOC_010466 NA coding downstream 12291 10012985 ~ 10013605 (-)
XLOC_010465 id4 coding downstream 45494 9977858 ~ 9980402 (-)
XLOC_010464 ncalda coding downstream 128127 9833256 ~ 9897769 (-)
XLOC_010463 grhl2a coding downstream 195445 9807263 ~ 9830451 (-)
XLOC_010462 tapbpl coding downstream 222898 9787383 ~ 9802998 (-)
XLOC_010468 ptpn2a coding upstream 2443 10055492 ~ 10071887 (-)
XLOC_010469 cep192 coding upstream 44073 10097122 ~ 10261652 (-)
XLOC_010470 flot1b coding upstream 234539 10287588 ~ 10316359 (-)
XLOC_010471 si:ch73-54f23.4 coding upstream 344391 10397440 ~ 10404383 (-)
XLOC_010472 NA coding upstream 368121 10421170 ~ 10429893 (-)
XLOC_010626 CR392024.2 misc upstream 10842063 20895112 ~ 20895175 (-)
XLOC_010461 NA non-coding downstream 264143 9759176 ~ 9761753 (-)
XLOC_010458 FO704756.1 non-coding downstream 459525 9564503 ~ 9566371 (-)
XLOC_010455 CR394537.1 non-coding downstream 723702 9302079 ~ 9302194 (-)
XLOC_010452 NA non-coding downstream 1346434 8668981 ~ 8679462 (-)
XLOC_010473 NA non-coding upstream 372698 10425747 ~ 10428540 (-)
XLOC_010477 NA non-coding upstream 796657 10849706 ~ 10859614 (-)
XLOC_010478 CU468227.1 non-coding upstream 863241 10916290 ~ 10916404 (-)
XLOC_010479 NA non-coding upstream 864535 10917584 ~ 10919434 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000016_09638800_09651752 CEP76 coding CI01000016 null 9638592 ~ 9651752 (-)