CI01000069_02906527_02909006


Basic Information

Item Value
gene id CI01000069_02906527_02909006
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2906049 ~ 2909006 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_02906527_02909006.mRNA
ATGGACGTCATCCAGGCTGAATGGGAGCCGCTGTCTCACTGGGAGCTTGATCAGCGATTAGACCGTGCAGTGGAAGAAATGATAGAGGCTGACCTGGTGGCCCAGGTTCAGGAGCAGTCAGCCTCTGTAACCCTGCAAGATTCTCAACAAGAGGATTCATCGCCTCCAAATAAGGCGCAAACAGCGACTCCTCGGCTGTTAGAGTCCGGGACAACTGTTTGCGCCTTGCAGCGTTCACATGCTACTGAAGTCATGGAGGCAAATCCTACCGTACAGTATGTGACAAATTTTCTGCAAAGCTCCAACACAAGCTACAGCAAGAACCGATTGTCTGGAAGAGCTCGACTGTCCCTGTCTCACACTGTCCTCCTGTCCCTCACCCTCCTGTCCAAACGCATCAGCTATCGCAGCGTGTCCTCGAGTTTCCATCTGGAGAAGGGAAATATTCACAGGATCTTCTTTTCTTTCTGTGATCAAGTGATCGCACAAAAGGATCGGCTCATTCAGTGGCCTATAGGACAGGAGGCCCTACAACATCTGCTTCCTTTCTCCAGTTGGCTGAGTCGCAATGAAGGTCTGGAAAAGAGAGGTCTTCCTCGAGTGCTCGGGGTGCTGGGTGACACACGCATCCCCATCCGCCTACCCGCTGGCAAACCGGACAGCGAGAGCGAGGCTCCGGAAGCCAAGAGACTTAAGAACGAACCACATCCAGATTCATGGCTGAACTTGGAATTGGTCTGCAATGACAAGGGCCGCTTCATTTACTGCCACATCAGCAAAGGCTCAGAAAAAGACAGAGGAAGAAAACCTCTACAACAGATCATTGGGAACCCATTTAGGCCGATTCAACCAGGTTGTGGCGGACCTAAAAGAGCGATTCCAGAAATTGAGATATTTGGATATGGGGAATTATGATAGGGCAAAAGCTGTGGTTCTGACTGCTTGTATATTACACAATGTTTTTCTGGACATGGGGGATGTGACAAAGGGACTGATAGAGAGAAGCACAGTGGAAGATGTGGAGGAGGTAAACGAAGATGCTGCTGGGGTCAAAATGAGGGAGACTGTAGTAAATCTTCTTTATAGTGCGTTGGAATCGGGAACAAAGTAAGATTCTGACACTGATTCGCATATTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTTACTCACCCTTATTTCATTCCAAACCTGCCTTTAATTCATCTTCAGAACACAGATGAAGATATTTTTAATATTTGTCTATCCATTGAAAGTACATGCATCATATGTCGAACATAATTATAAACATAATCCATATGAATCTAGCCATTTACTTCAAATCTTCTGAAGAGACACAATCACTTAATATGACAAACACAATTAAGTTAGGCTAACAAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_02906527_02909006.mRNA True 1393 mRNA 0.46 4 2906049 2909006

Neighbor

gene id symbol gene type direction distance location
CI01000069_02895817_02903000 NA coding downstream 3049 2895690 ~ 2903000 (-)
CI01000069_02865724_02867576 NA coding downstream 38473 2865701 ~ 2867576 (-)
CI01000069_02839630_02842415 PAQR4, PAQR4A coding downstream 63563 2839167 ~ 2842486 (-)
CI01000069_02822758_02831326 NA coding downstream 74723 2822490 ~ 2831326 (-)
CI01000069_02801133_02811021 PPP1CA.L, PPP1CAA, PPP1CAB, PPP1CA, PP1G, PPP1CC coding downstream 94835 2800365 ~ 2811214 (-)
CI01000069_02911501_02921826 TCEB2, ELOB, TCEB2.L coding upstream 2475 2911481 ~ 2922687 (-)
CI01000069_02934862_02943383 ARL6IP1 coding upstream 25086 2934092 ~ 2943383 (-)
CI01000069_02944962_02977798 SMG1 coding upstream 35827 2944833 ~ 2977798 (-)
CI01000069_02997434_03008924 NA coding upstream 88269 2997275 ~ 3008924 (-)
CI01000069_03014089_03015762 ITPRIPL2 coding upstream 103690 3012696 ~ 3016506 (-)
G275658 NA non-coding downstream 11083 2892738 ~ 2894966 (-)
G275681 NA non-coding downstream 136737 2768956 ~ 2769312 (-)
G275672 NA non-coding downstream 265515 2640335 ~ 2640534 (-)
G275671 NA non-coding downstream 266011 2639787 ~ 2640038 (-)
G275670 NA non-coding downstream 266300 2639512 ~ 2639749 (-)
G275843 NA non-coding upstream 310803 3219809 ~ 3220041 (-)
G275856 NA non-coding upstream 352290 3261296 ~ 3261504 (-)
G275814 NA non-coding upstream 371906 3280912 ~ 3284191 (-)
G275772 NA non-coding upstream 397483 3306489 ~ 3312896 (-)
G275876 NA non-coding upstream 448215 3357221 ~ 3357421 (-)
CI01000069_02589498_02621318 SYT3 other downstream 275733 2589469 ~ 2621641 (-)
CI01000069_01645966_01647142 NA other downstream 1258723 1644522 ~ 1647326 (-)
CI01000069_00952894_00955774 NA other downstream 1950259 952361 ~ 955790 (-)
G275178 NA other downstream 1960245 926923 ~ 945804 (-)
CI01000069_00041648_00043198 EHD3 other downstream 2862677 41648 ~ 43441 (-)
G275699 NA other upstream 83498 2992504 ~ 3078168 (-)
CI01000069_03415853_03417644 LIMD2 other upstream 503967 3412973 ~ 3417644 (-)
CI01000069_03768812_03787588 BRSK1 other upstream 856667 3765673 ~ 3787588 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location