CI01000069_03014089_03015762 (ITPRIPL2)


Basic Information

Item Value
gene id CI01000069_03014089_03015762
gene name ITPRIPL2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3012696 ~ 3016506 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_03014089_03015762.mRNA
ACTCTGTGGACTGATTAAGAGAGATGACAGTGGTTTCTTGTTCAGTATCACAAGGTCAGGGGTGACCGGGGGAAGGCTTGTGCTGAGGTTAGGGGTTGGTAACGGATCAACAAAGATACAGATGTCTTACTGTGACACTCCTTTCAAAGAGAAATACTTGGAGTGTGTGTGTGTGTAGTGTTTCTGTAAACTTTCTCAATTATCTTCTGTGTAGTTTACAAGGGCCACACCTCTACTGACATCATTTTTTATAACTATCGAGTTATTTTAAAAGTTGTGTGATGGTGTGTCACAGTTTCACATTGAGTTTCACAGTGAAAAGAAAGTAATACAAGTTTGGATTGACATGAGGGTGAGTTTTGTTTGAACTGTCCTTTAAGTATAGCACCCTTTATTATTAACATTTACAATGTTAATAATACACATTTGATTTTTTTTTTTTTTTTTTTTTTTTTGATCAAATTGGTTTTTCTATTCAAGCATGTGGAATATTCATGTTGGGTAAATCTCTAAGCCAGGACGCATTCTGTCAGTAAGCACTTCCCATTTTGAGATCTGTTTCTTTAAGAGAAGAGGGAGGAGGAGGGTGGACAGGCTCTGGGTTTTGAACGCCTCTTTTTTTTTAAACAGAAATTCCTCTCTCAAGAGTTTGGCATTTCCTCTGAGCTCACACACTGAGAGCCTGCTCTCTCGTTTCACACAGTGCTCACTTGTGACAAAAGGGGGGATTTTCAAACATCCTGAATGAGAGGACTCCTCTTGCCCTCGGCACATGCTGCATCCGCAAAGAAACTTCACTTGGCAAACTTCCCCTTACACGACGGTTTCTGTTTGAGGGGGCTAAAAGAACATCAGCTTGGCCTTGTTTTCAGCATCTGGATGATTGGTTTGGCATGGGCTAGCCCTAACTTTTCCCACAGAGCTGGAGTAGACTGGAGGAGGATGAGCGTTTACACTCTCAACCTCAGGTTGTTCTGGCCGCTGGTCACTTGTATCCTCACCGCTCTGCTGCTACTGCACCAATACATCATCAGCGGATCCGAGGACCAAGGGAACGACTGCTCTGATCAAGGACTTGGAGCTGTCACACTTTTTAAGTACATCCTAGCATTTATCTTATGTTATTTCTTCATAAAGTACTGCTCAACTCAACCTGGCTCTGCTAGGAGGGCTTTCCACAAAGTCCCGGAGGGGCATGGAAAATCTGGTGTCTCTAAGAGAGAGCTACTGGACGATCACTATGAAAGGCATGTGCGTCTCTCTCCACATGTGCTGGGCCACAGCAAAGCCCATGTTGCCAAGCTGGTGAGTGAACTTGTAAAGGTTGGTCGCACCGATGTCCCGCCGGAGTCTTCGCTGGCCTTCCGGGGTGACTTCATCCAGATCGGCAGTTCCTACGAGGAGCACAAGGTGGGCTCACCTGACTGCTTCGACATCCTTGTGCCTCTGCGGGCACCTCGTGGGCTGAAACTGGAGGCCAGCGTTTGCACTGACAAACACGGAGGGCCACCTCTGTGCACGCTGAACACGCCTCGCAAGGCGGAGTGGGCACGTCGTCACAAAGCCTTCACGGACACGTTTATGCACTTGCACAATGCTCAAGGTGTCTATAAGATGAGCCCGGATTCCGTACAGCGCTGGTTTTACACAGCCACCCAGCGCTGCCTCGCTACTTTCCGTTACCTGTTTGAGCAGCGCTGTTCCCTCAGCCTGTCTCTCAGTGAGGAGCAGCAAGTGCTCCTCCGTCTGACACCCCGCTCCGATTATGTCTGCTGCCACATCTCCATGGGCATTCGGCTGATCCCAGCCTTTCCTCTAGGTGATGGTGCCTTCTTGGTGGCATCCCAGCGGAGTCAGCGAGGAGAAGACCTTTGGACAGTGTACTTTCCCAGGCAGGAGCAGAGACTGCTGGCATGGCTAAAAGGTAGACTGCCCTCCAACTCCTGTCATCTAAAGTGCCTTCAACTCCTAAAAGAGGTGCGTAACCTCAGTGGGGAGACGCTGGACCAGAAGTCTGGAGCTGAATGGGGAGGAGTGCTTTCGTCCTATGCTCTGAAGACCGCTTGGCTTCGTTTACTGCTCAGTACACCCCCTGAGGCCTGGGAAGAGTGCAACCTTGTGGACCGGCTGGATGATCTTCTTCGCAGTCTAAGGGAGAGCCTACAGTCTCGGGCTCTCTGCCATTTACTCCTTGGAGGCATTAATGGGCTTCTGCCAGACTCTGTCGCTCTACCCAAACTTGTGAAGGAGACTGTACCCTCCAACCTGTGGGCGGAATTCAGTGACATCACCCTTGATATGGTCTCCGCCCGACTGGCTTATTCATGGAACCACCTCCCTCGCCTAATTCGCCTCGGGCGGCCACAGAGGACCAGCCTTGGCAGAGGTGTTCGCTGCAAATATATTGATACAGAGTAAAGGTCAACTATAACTGGTGTTGCCGAACACAGCGATGGTTTATGTTTTCAGAAATTAATCACATATCTTTATCTCTTTTTTTTTGCATCTGACTTTTCAAAATTAAGTTAAATTAATTTGGGGATTGTTTTTCTCAAAAGGAAGCAGTCAAAGCACTAGATTAGAGCACAATAGTAGCATTCAGTAGGTATAGCAATACTTTTAACAAATCAGTCTTGGTACTGTACAAATCAGTATTGTACTGTGATTGCAGGACAGACTTTGAAAAGCAAGGTCTGCAGAAAGGTACTGTATACCTCCAGGAGCAGGGTTGGAGATTAGGATTTAGGTGTTTGGACATGAAACTCATGCGTTTTTGAGAGCTGCTAGACTTGTGTTGACTCAGGGTGACCATGATGTCATGGTTATGGGGTAGTCAAAACAGCATATACACCAAAGATTTTCCACACCCACACAGTATTAGTAATGCCAGCCTAAACAGATGAACATCCTGTTTTGAAGGGAAGAACTGCAGTGTGACCACTGTAAAAATCATCTGCTGTGTCTTACAGAACCAGATATTTTCTTTATTTTGAATGAATGAATGATGTTTTATAACTGTAGCAATTTCAGTATTGCTTAATTGATTGTTAAAGTGTTCCTTTGATATGTCAGATCATAATTAGTGCTTTAGTTCACCTCAGTTTGTTACCTTAATTGGCACACTCGAGGATAAGGCACTGATGGCATAGCTTCACTTCATCTTGCCTGTCTACAGGGACATTATGTGTGCACGTGATCTTTTCCCTCAGAGACATGGCTCTATAAGTTGTCACCATGGAGACTACCTCAGCCCAGGGTCACTTATTTATGCAATAGCTTTAGTTTTAATGGCTGATTGCATTTACTTTCACAAAGGCAGCAGAGATCCTTATTGATCTCTTGCCGGTACTGAGTGTCACAGGGTTAGTTTGTTGGTCTCTTTCCTGCTTAAACCTCATCCATCTACCTGTTATTAAACAAAGTGTTCATGGTCATTTATGTCAGACATATCTTAGTTTTATCAACTTTGCAGGGAAATGTTTGTGGTACCTAAGCAAATTTCTTTGAAGCTTATTTTTGTCTGTTCTCTAAAAGCGGAACAGAAAATGAAATAAGGAAATGAAAAAGAACATGCTCTAAAAACAATGCTTAAATGTAGTCCAAAACAAGCAATATAAAATACAGATTAACTAATGTTGAATGTATATGTATATTAATGTATATGTAATTTAATGTATATTTGGTACTGTATGTGAATGTAAGTTTATTGTAAAAGAAATTGTACTTGATGTACATAGAGTAAAACAATCTGTGTGTATTTATATAGTAGATATAATTTATACATGTATTTTAATACATGAATTGAAATAAA

Function

symbol description
itpripl2 Predicted to be integral component of membrane.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_03014089_03015762.mRNA True 3811 mRNA 0.44 1 3012696 3016506

Neighbor

gene id symbol gene type direction distance location
CI01000069_02997434_03008924 NA coding downstream 3772 2997275 ~ 3008924 (-)
CI01000069_02944962_02977798 SMG1 coding downstream 34898 2944833 ~ 2977798 (-)
CI01000069_02934862_02943383 ARL6IP1 coding downstream 69313 2934092 ~ 2943383 (-)
CI01000069_02911501_02921826 TCEB2, ELOB, TCEB2.L coding downstream 90009 2911481 ~ 2922687 (-)
CI01000069_02906527_02909006 NA coding downstream 103690 2906049 ~ 2909006 (-)
CI01000069_03027056_03028752 APNL coding upstream 10419 3026925 ~ 3028752 (-)
CI01000069_03032171_03032924 NA coding upstream 15484 3031990 ~ 3032924 (-)
CI01000069_03242808_03248880 NA coding upstream 225313 3241819 ~ 3248880 (-)
CI01000069_03298533_03302831 CCDC47 coding upstream 281691 3298197 ~ 3302831 (-)
CI01000069_03315611_03353645 KCNH6, KCNH6A coding upstream 299006 3315512 ~ 3353733 (-)
G275658 NA non-coding downstream 117730 2892738 ~ 2894966 (-)
G275681 NA non-coding downstream 243384 2768956 ~ 2769312 (-)
G275672 NA non-coding downstream 372162 2640335 ~ 2640534 (-)
G275671 NA non-coding downstream 372658 2639787 ~ 2640038 (-)
G275670 NA non-coding downstream 372947 2639512 ~ 2639749 (-)
G275843 NA non-coding upstream 203303 3219809 ~ 3220041 (-)
G275856 NA non-coding upstream 244790 3261296 ~ 3261504 (-)
G275814 NA non-coding upstream 264406 3280912 ~ 3284191 (-)
G275772 NA non-coding upstream 289983 3306489 ~ 3312896 (-)
G275876 NA non-coding upstream 340715 3357221 ~ 3357421 (-)
CI01000069_02589498_02621318 SYT3 other downstream 382380 2589469 ~ 2621641 (-)
CI01000069_01645966_01647142 NA other downstream 1365370 1644522 ~ 1647326 (-)
CI01000069_00952894_00955774 NA other downstream 2056906 952361 ~ 955790 (-)
G275178 NA other downstream 2066892 926923 ~ 945804 (-)
CI01000069_03415853_03417644 LIMD2 other upstream 396467 3412973 ~ 3417644 (-)
CI01000069_03768812_03787588 BRSK1 other upstream 749167 3765673 ~ 3787588 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 other upstream 788110 3804616 ~ 3807180 (-)
CI01000069_04932463_04940554 NA other upstream 1923015 4932144 ~ 4941471 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location