CI01000069_03986480_03988243


Basic Information

Item Value
gene id CI01000069_03986480_03988243
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3985177 ~ 3988612 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_03986480_03988243.mRNA
ATTATTCTGAACTAAATACTTTTATATACCATTTCTAAAATATGTATATACCCTGTTGAAAAGTTTGGGGTCAGAATGATTTTTAAAAAAAGAAATTAACACTCTTTTTTCATCAAAGATACATTAAATTTATCAAAAGTGAAAGTAAAGACATTTATAATGTTGCCAAAAAATTGTATTTTAAATAAATTCTGTATTTTTAACTTTCTATTAAGGCTATAAAGAATCCTTAAGAATCTTATTAAGCAGCTAATGCATAAGGAACTGAACTTTATTGTAAGTGTATTCATTTTATTTTCAAGTGTTTTCCTGTCTTGTCGTCACGTTGTCTGTACTCATGTCTTGTCTCAATCTTTTACAGAAGTCACAATGGAGATGACTTTGCTGTCCATCACAGTGTGGTTCACTCACTTCCTCATCGCCTCGGCTCTTTATTTCAACACACTGCCAACAAATACCATGAGTGGCTACACTGAAACCACACAAGTAACTCCAGCAACAACAAAAACAAACCAAGAGCCCAAGATCCTAATTAATGCAACGCCTTTCTCACCTCTGAACACGACGCAGGACAGCACAACAAATTTGCCCAGTGACGTGCATACGCAGCCAAACACAACCCCAAATGTGATGTCGACACAGGAAACAACATCCCTGCATCAATACAACAGCAGTACTTCATCTCAGAATGACATGATGGATGATGGCGTAGGCATTTCTAGTAATGTTGCTGTGAGCCACAAGAATACAAGTCATGCAACAGTTTCCACTGACTTTGCAAGACTGACGCCACAAAATAATGAAACAGAAACCATGTCAAGTGTGAGTTACAATAATGGCGGACAACCAGTTCAGACTGCAGACACCTTATCAGACCCATTCAACAGTGTCTCAACAGTTCCCTGGACAGAGAAAGAGGATGATAGAACAAAGGCAGATGAAGGAAATTATGAAACAAACTCCACCCAGGCCACATTTGCTAATACGAAAGAGGAGTCGAGAGGAACACAGAGTACTGAGGGAAGTTACAGCCTAACAAGTGAACACAGAGAGGAACCTTACGACACAGCAGCGAATACAATCGGTTTAAGTGCTGCAACGGCAACAGCGAGCATAAATGACTGGTCAACTTCACAAAACTCAGACATTCCCATGAACACGACGGCTTATACAACAGCACAAGACCCAACGGTTACAGATGCACCTGAATATCACACCTCAATAGGTGGTGTAAGTGCGAGAAATCATGACTGGTCAACTTCACAAAACTCAGACATTCCCATTAACACAACGGCTTATACAACAGCACAAGACCCAACGGTTACAGATGCACCTGAACATCACACCTCAATAGGTGGTGTAAGTGCTGCAACGGCAACAGCAAGAATTCATGACTGGTCAACTTCACAAAACTCAGACATTCCCATTAACACGACAGCTTACACAACAGCACAAGACCCAACGGTTACAGATGCACCTGAATATCACACCTCAGTTGGTGGTGTAAATCTCTCAACGATACAGCAGAACAGATTCACAAACTCTACGGCACACACAGGAAGAGAAAACATTACAGGAACAGACACACCCGGTGTTACCACCACCTATAACAATAACTCTATCATAACCGTTGTCCTAACTGATGCCACAACCAACGAAACAAACAAAACTGACACAGAAAGCAAAGTATGGCCTAAATGTTTGAACCCAAACCCAGAATCTCAGTCTCGTCATTCCAGACTGGTCTGCTTCATCACAGTGTGGGCTTTAGCAATGACTGCTACCTTATTCCTAGGAATAACCATCTTCCTGTGGGTGCGTCTGACGGTCTTTAAAAAGAAGATGAAGCGGAGGGAGAAAGGAGGCCAGAAGTGCGAGAAAGAGAGCCTTTGGGCCGACCCCAAAGCATCGGTGCAGGAGAGAGTGGAGTTCTGGTACGTCAATGGATCCACTATGGAGGCCGACAGGAAGCAGAAAGACAGAAAGAGGCAGGAGAGGATGAAGAGAAGAGAACAGCAACAGGATAATGAGGAGAATGGGCTGTGGATTCAGCCTAGAGTGACTATGGATGACATAACAGAGTTCTGGTACGCAAACAGGCGCTTGAAGGAGGAGAGGACGCAGGACATGTAGTTATAAACTTTGAAAGACAGAAAACAGTTTGGACAGACATACCTTCAGGCTTCTGCCTAAAACAGAAAGGGGGATTTTGATGGAAACTTTATTTGAGCAAGTAAATAAGTCTGAATAAGACGTCACGTTTGTGGTCCTACAATTGTGATTTGTGCTCAGCTGTACACTGTAAAAAAAAAAAAAAAAATCCAACTTCCATTTTGTCAGACAAACTCTGTTATACAGGCTGAATGAATTATAGAAAGTACAAAAAATTGACAATTCAATGTCATTACACAGCAAAAACCTGTGTGCTATTGGAGTTATTGTAAATATGAGCTTTCTACTTAGAAATTGGACATGAACAGCCTCTGAAGTGACAGTTGGGTGGCCCATAAACAAGGCAAAAGTGAGAACTGTAATGACTTACGTTTTATTCTTTTTTCCCCACAACATCTAAAGTCATGCATATTTACGTAAATATGCCATGTATGTACGCATATTGTATGTATTTTTAAAAAAAAAAATAATAGCATTTATTTGACTGAAATTCTGGACTCATCAACAAGCTGGCTATCTAGATGTTGTGAATGTATACAATTGGGAGGGTAATGTTTATATGGTTGCCAACAAATGGGATCTGCATTTTATTCAAAAATATTTTCTATACATTTTGGCTTTAATAAGAGTTCCCCAAGAAATAGGCAAAAATTAACCTGATGTCCAATTCTTTCTGACAATAAAGCACTTGAAAACGACAAACTAGTAATTACGACTTTAGAAGTGGAAGTAGGAAATTTCCAATAGCACATGAAGTCAAGTTTGGTGGTCAGGGTCGAACTAACAGGCAGCTGAGCATGCTCAGTTTGATCACTGATGATGCACTTGAATTTAAATTGTGATTCTGGTCAAAACTTGGGGACATAATGACTACATAAATATTTGTTATTCAGAAGTAATAGATGTTTTAACTCTATGTGATGTTTTTGATTATATTTTGTTGTTAACGTTGTGCTATGTTTCAAGTCACCCATAGAAATTATTCCATTTCAATGAGTATAAACACAACCTTTTCAGTTTGCTTAAACTGAATTATACATTCTTTGTCTATCACTATTTTGTAGTCTTAATGCTCATATTAATTTAAAATTCAAGTTTACTGAACTTTTTTTTCCACAAAAAAAAAAACAAACAACATTTATAAAAAACATTATCTATTTATAGAACTTATGTTGAAAGCACAGACCTATTACTTTAATTGTTGATACAACATTTGTTTCCATATGTTACTTAGAAAAGTTCTGAAGCTTAACAGTGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_03986480_03988243.mRNA True 3436 mRNA 0.38 1 3985177 3988612

Neighbor

gene id symbol gene type direction distance location
CI01000069_03972492_03982847 TSPAN4B coding downstream 2220 3972090 ~ 3982957 (-)
CI01000069_03939251_03942780 RCN3 coding downstream 42082 3939204 ~ 3943095 (-)
CI01000069_03871972_03884153 NA coding downstream 101024 3871925 ~ 3884153 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 coding downstream 177997 3804616 ~ 3807180 (-)
CI01000069_03768812_03787588 BRSK1 coding downstream 197589 3765673 ~ 3787588 (-)
CI01000069_04129986_04133876 MYLPFB, MYLPF, MLC-2, MYLPFA coding upstream 141113 4129725 ~ 4133923 (-)
CI01000069_04140312_04141990 NA coding upstream 151002 4139614 ~ 4142844 (-)
CI01000069_04160575_04161329 NA coding upstream 171374 4157983 ~ 4161329 (-)
CI01000069_04171520_04172634 NA coding upstream 182723 4171335 ~ 4172634 (-)
CI01000069_04174676_04182006 MYST2, KAT7 coding upstream 185179 4173791 ~ 4182006 (-)
G275953 NA non-coding downstream 25286 3959570 ~ 3959891 (-)
G275946 NA non-coding downstream 84011 3900905 ~ 3901166 (-)
G275827 NA non-coding downstream 136198 3848581 ~ 3848979 (-)
G275773 NA non-coding downstream 141591 3839234 ~ 3843586 (-)
G275790 NA non-coding downstream 158597 3823392 ~ 3826580 (-)
G275966 NA non-coding upstream 39346 4027958 ~ 4028557 (-)
G275970 NA non-coding upstream 47727 4036339 ~ 4036573 (-)
G275972 NA non-coding upstream 48873 4037485 ~ 4037709 (-)
G275975 NA non-coding upstream 64216 4052828 ~ 4053065 (-)
G275825 NA non-coding upstream 91670 4080282 ~ 4081421 (-)
CI01000069_03415853_03417644 LIMD2 other downstream 558803 3412973 ~ 3417644 (-)
G275699 NA other downstream 907009 2992504 ~ 3078168 (-)
CI01000069_04932463_04940554 NA other upstream 950909 4932144 ~ 4941471 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026485 si:ch73-248e21.5 coding NC_007114.7 CM002887.2 32607780 ~ 32611833 (-)