CI01000069_04298346_04340021


Basic Information

Item Value
gene id CI01000069_04298346_04340021
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4297974 ~ 4340481 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_04298346_04340021.mRNA
ACTGATAGAGCAAGATAATTTCTTTTATTTGTCCTCTTTCATGGACAAGTAACAAATTGCAACAAAGCCGGATTGGATTGGTTTTGTCAGCTCGAAACTAATCCTATAACCCTGAGTTTGTTCAACTACCCTCATGGTACATGCCCCTGTTGTGCATCTCAGAGCAACAGTGCAATGTTTCATACTTGATATGAATCTGTTTTTAAATGAATCTTTTGAGTCAATGATTCAATGACCCATTCATAAAGTATCACTCTCATACACACATACAGACACATATTCCATATATGATGTTTTATCAACAAAGTTCGGGAGGAGCATGTTCAGATAATTAACCTAATTAACACGAGTGGAGAGCATTCAGTTAATCAACTCAATTAACGACAAGAGATATATATACAGCAGTCTTACCTCTGTTTGTTTGACAGTTTATCAGCATTTGGTTCGCCCGTTTGCTACAATGTCTCAAATTCAACTCTTCCCATCTGACGACGAGTCCAGCTCTTCTCCGGATCCTCTACCGCTGGCCTCAGGACCACTCCTTCTTTGGCTGATACCGCCACTGAGCCCCAGGCTTCATCATGCAGGTGACCTGCAGAAGCCCTCTCTTTCCCTGATCTCCACACATACAGTTGTTTCTCCTGGAGAAAACATTCAGTTCAGATGCACAACACCTAATCCAAGATGCAATGCTGATGCTGAATTCCACCTCTTCATAAATGGATCATCTATATTATCCTCCCAGAAACATGTATCTAGTGTGACTTTCAACCTTGTTAATGTAAGCGTCTCACATCAGGGCAGCTACAGCTGTAATTACTCCTACAAAAACAGCATTATAAAGTCACCTTGGAGTAACACTGTTGAAATCACTGTGGTGCAATTGCAGCAGCCCAGCATTCCCTGCATTGCTCCTGATGGACAGTTTGATGTTGGGCCTCAGGGGCCAATGATCCCATGGGGCGACAGTTTCACTATCATCTGTTCCACTGAATCTCAGTATCCTGGAGGCTCCTTCTATCTGTTTAAGGAATCAGATATCACCAGGAGACAGTCAGCTGTCGATCTGTCTGCCTCCTTCTTCTTTCCTGAGGCAGATTTTTCACACGAGGGAAACTACAGCTGTGTTTATGAAGTCATTTTGTCCTCACGCACCTTTCGTTCATCTGCTTCTGAACTGCTGGTCATCACTATCACAGTGCACTTGCAGCAGCCCAGCATTCCCCGCATTGCTCCTGATGGACAGTTTGATGTTGGGCCTCAGGGGCCAGTGATCACCAGGGGTCACAGTTTCACTATCATCTGTTCCACTGAATCTCAGTATACTGGAGGCTCCTTCTATCTGTTTAGAGAAGCAAATATCACCAAGAGTCAGTCAGCTGTCAACCTCTCTGCCTCCTTCTCCTTTCCTGAGGCAGATTATTCACATGAGGGAAACTACAGCTGTGTTTATGAAGTAATTTTGTCCTCACGCACCTTCTGTTCATCTGCTTCTGAACTGCTGGTCATCACTATCACAGCCTCCCTGCTTCCTGTCATTGGTGCTGTGGTGTCAGCTGTGCTGCTCTTATTGTCTGTCTTCATAATCATCCTTCTGGTCAAGAGAAGACAAAAACAAAGGAATAAGGAAACTCATTTGAAGTGCTCTTTTAAAAAAGGAGGTTCAGCTAATACGTATGCAGGTGGATCACAACATAACAAAAATGAAGATGATGAGGCTGATCATGAAAATATACAACTTGATGAAAACATGGATCACGATGATTCTGAACAGGACTATATTAATATAGACTCTGATCATTCTGAACCGGACTATGTCAAGGTGGACGCGGATGACTCTGAAGAGGTCTATGTCAATGTGAATGTTACAGAGAATAAAAGTGTGGTGTACAAATCTGATGATAACATTTATGAAAGATGTTGTGATGATTAGTGAGTGAACCCAAAATACTATAATTAATGAGGCTCCAAACTGATGGTTTTAATGAAAAAAGACCTTTAGAGTGTGATGAACAGAGAGACAACAGATGACTACAATCTTGCAAAGCTTTTGTGCTAAATATGAGTGATGATAATACAGTGCATTCATTCTTCAGTGCATCACAGACTGCTGCACATGTTCCAACTGATATATTTTGTTTATTGTATCCAGTGATGCAAGTGATATCCCAGGGATATAAGACTGTCTCTTGATCACAATCTTGATTCAACAGGTGAAAGGAATGATTTAAAATGATTTGCCAAGGCTAAAAGTTTAATGTTGAAATATAAAGATTGTGATATACTGCTAAAGAAAGTGAATAAA

Function

NR:

description
hypothetical protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_04298346_04340021.mRNA True 2305 mRNA 0.41 6 4297974 4340481

Neighbor

gene id symbol gene type direction distance location
CI01000069_04265905_04279103 NA coding downstream 18803 4265635 ~ 4279171 (-)
CI01000069_04241400_04252572 NA coding downstream 42442 4241400 ~ 4255532 (-)
CI01000069_04217948_04222207 NA coding downstream 75767 4216694 ~ 4222207 (-)
CI01000069_04195558_04198312 AOC2 coding downstream 99473 4195108 ~ 4198501 (-)
CI01000069_04184836_04186691 G6PCB coding downstream 111138 4184215 ~ 4186836 (-)
CI01000069_04350619_04363291 NA coding upstream 9971 4350452 ~ 4363682 (-)
CI01000069_04370591_04375147 NA coding upstream 29415 4369896 ~ 4375147 (-)
CI01000069_04380270_04382951 NA coding upstream 39691 4380172 ~ 4382951 (-)
CI01000069_04387255_04404199 RARA, RARAA, RARAB coding upstream 46516 4386997 ~ 4404343 (-)
CI01000069_04444787_04454292 NA coding upstream 103745 4444226 ~ 4454292 (-)
G275770 NA non-coding downstream 82284 4143168 ~ 4215690 (-)
G275808 NA non-coding downstream 88325 4207592 ~ 4209649 (-)
CI01000069_04160575_04161329 NA non-coding downstream 135559 4157983 ~ 4161329 (-)
G275992 NA non-coding downstream 162574 4135088 ~ 4135400 (-)
G275982 NA non-coding downstream 209616 4087961 ~ 4088358 (-)
G276042 NA non-coding upstream 186601 4527082 ~ 4527880 (-)
G276052 NA non-coding upstream 214728 4555209 ~ 4557664 (-)
G276064 NA non-coding upstream 273373 4613854 ~ 4624902 (-)
G276129 NA non-coding upstream 324689 4665170 ~ 4665413 (-)
G276133 NA non-coding upstream 328851 4669332 ~ 4669811 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 other downstream 490897 3804616 ~ 3807180 (-)
CI01000069_03768812_03787588 BRSK1 other downstream 528754 3765673 ~ 3787588 (-)
CI01000069_03415853_03417644 LIMD2 other downstream 871600 3412973 ~ 3417644 (-)
G275699 NA other downstream 1219806 2992504 ~ 3078168 (-)
CI01000069_04932463_04940554 NA other upstream 599040 4932144 ~ 4941471 (-)

Expression


Co-expression Network