CI01000069_04574882_04576116


Basic Information

Item Value
gene id CI01000069_04574882_04576116
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4574366 ~ 4576128 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_04574882_04576116.mRNA
AGAAATGTGAAAATGGTCCATTCTAGGCCCAGCTCCACAGGGGGACCAGGGATCTTCTTACCTATCATAACCTTTGTTTTTTTGGCAATCTGCTGTACTGGCTTCTGTAAAATGCTCCAGCGGGTCCGTAAGGAGCGCATAGAGCACCTGCAGGCTCAAGCCATGGATCAATCGTCTGTCTACGTCATTCCGATCTCTCTGTCCGATGATGACCTGCACAGACCGCCACGCTACAGCACCGTACAGTTCTACGAGCCCCCTCCTGCTTATAACGAGGTAACCGTGGAGATATTGTCAATTATCTACACCATCATTGAATGAATCTTGTCCTGAAATGTTTAAGTTCACTGTTAATGCTTTTTAAGTTAATGAGGATACAACATTTATCTTGCAGTTACATATAAAGGCAGAAAGCCCTCTGGAACCCCCTCCTGAATATTCAGAGTCTGTCTCTGCCTCACCTTCACATTCATGAATCATGATCACACCAAACGTCAGAGTATCTCAAGCACTTGGACTGGTTAAAGGAAAAAAAGAGGCAAAGTGGGATTCTCGTGACTTTTTCTAAGGACTATGATTCATTCTACCTATGCAAAGGATAGTGAGGAATTTAAATAGGGGGAAGAAAATGTAACAGACGTGATGATCTGTGATTCTGTTGGGATTTTGAACATGTCTTACAGGGTCATGAACTATTTCACACTATGAGCAGAAGGAACTTGGTTAAAAAATTTAAAAATGTATATATGTTTTTAGTGAATATTTATAAATTTTGCACACGCTAGCTAAACCCTTTTTGTTAACTTTGTGAAATGAAATGTGTTAATTTATAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_04574882_04576116.mRNA True 837 mRNA 0.40 2 4574366 4576128

Neighbor

gene id symbol gene type direction distance location
CI01000069_04444787_04454292 NA coding downstream 120074 4444226 ~ 4454292 (-)
CI01000069_04387255_04404199 RARA, RARAA, RARAB coding downstream 170023 4386997 ~ 4404343 (-)
CI01000069_04380270_04382951 NA coding downstream 191415 4380172 ~ 4382951 (-)
CI01000069_04370591_04375147 NA coding downstream 199219 4369896 ~ 4375147 (-)
CI01000069_04350619_04363291 NA coding downstream 210684 4350452 ~ 4363682 (-)
CI01000069_04579172_04593867 NA coding upstream 2481 4578609 ~ 4594023 (-)
CI01000069_04595809_04598174 NA coding upstream 19622 4595750 ~ 4598174 (-)
CI01000069_04599199_04600481 RL23, RPL23, RPL23.L coding upstream 23041 4599169 ~ 4600481 (-)
CI01000069_04603992_04607459 NA coding upstream 26971 4603099 ~ 4607586 (-)
CI01000069_04628032_04638137 SGSM3 coding upstream 51725 4627853 ~ 4638137 (-)
G276052 NA non-coding downstream 16702 4555209 ~ 4557664 (-)
G276042 NA non-coding downstream 46486 4527082 ~ 4527880 (-)
G275770 NA non-coding downstream 358676 4143168 ~ 4215690 (-)
G275808 NA non-coding downstream 364717 4207592 ~ 4209649 (-)
CI01000069_04160575_04161329 NA non-coding downstream 411951 4157983 ~ 4161329 (-)
G276064 NA non-coding upstream 37726 4613854 ~ 4624902 (-)
G276129 NA non-coding upstream 89042 4665170 ~ 4665413 (-)
G276133 NA non-coding upstream 93204 4669332 ~ 4669811 (-)
G276094 NA non-coding upstream 123143 4699271 ~ 4703469 (-)
G276114 NA non-coding upstream 127924 4704052 ~ 4710962 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 other downstream 767289 3804616 ~ 3807180 (-)
CI01000069_03768812_03787588 BRSK1 other downstream 805146 3765673 ~ 3787588 (-)
CI01000069_03415853_03417644 LIMD2 other downstream 1147992 3412973 ~ 3417644 (-)
G275699 NA other downstream 1496198 2992504 ~ 3078168 (-)
CI01000069_04932463_04940554 NA other upstream 363393 4932144 ~ 4941471 (-)

Expression


Co-expression Network