CI01000069_04595809_04598174


Basic Information

Item Value
gene id CI01000069_04595809_04598174
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4595750 ~ 4598174 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_04595809_04598174.mRNA
ATGGAGAAATCTGATATAATAAATTTCAGCTGTCTTGAAAAAGAGCTACAAGCGGCGCTGGAAGCGGATAGGAAATATCAGAGGGAAAATGATGCCAAATTTCGTGCTTTGAACCAAAATGTCGCCAGCTATGAAGAATTCAGAGACATAGTACTTGCATCTCACTTAAAGCCTCTTGATAAAAAGGACATCTCTGGTGCAGCAAGAAAGCAGCCGTGGAATCCAATTGCTTTTGGGACAAAGCATGAAAGTGCTTCAACTGAAGAGGTCCAGCCTTGGGTATCTGAGATTCAGCCAAGAAGTGCATCAGAATTCATCCGTGACTGGCGCAGGTTTGCAGGGAACTCGTTTGAAAAGTACAGTCTCCTTGTGAGTCTGGGAGGCAAGGCTCTGCAGGAAATCTTCAGCACTGAGGTTGGCTTCGGTCTTCTAGGCGAGTTCTTTCTGATTCTGTCACAGTGTCTTAAGTCAGGGGATGAGGAAAAAGTGATTGGAGTGCTGGACGGCCTTTCCAGAACTGGCCGCTTTGGCCTCAACCAGTCTCTTCTTAGTCAGGCAGAACAAAAAGCCTGTGAGGAGCTTTTCCACAAGCTACAAGTTGCAGGAGGAGAATATCATACTTCTAAAGATGATTCTTCTGACACTTCAATGGTTTGTGAGGCCAGTCTGACCCATGTGGAGGAAGATGAGACCGACATTACAATAAAACTTGAAAGCAGAAATATGTTAAAAGAAGTGCTGGTCATTTGTTTTTCAGCCATCTTCCCATTGTTACTTTCAGCCTATGAGGCTCCTGAGGATAAGGAGGACATTTTTGCCAGCAGGCCCTGTCCTGCATTTCTTGTCTTTGACACCGCTGCCTTCATAGCCGACATGACCATTGAACTTCCTTGTCACTGCAAACCAGAGGAGACTTATTCAGTGGTATGGTACTATCAAAAACAAATTGGCTCCATGAACACCAAGGTCCTCACGGACTTTGAAGGCACAACGGTGGTGGAATCATCCAAAGTTGGCAGAGGGTCAGATCTGTACAATCGCTTTTCCATCCGTTTGTTCAGCCTTCTCATCTTCAGGGTCCAGAAAGCTGACTCAGGGCACTATATCTGTGGCACGGCCTCTGGTGAATTCTTCTACGGCTACGACGTTGATGTCCAGGAGGTCCGTCAAGTTTTATTTCCCTGGAACGTCAAACAGAGAACTCAAGTACAAGAAGCAGAGCCCGTCAGAATGAAAACGGAAATGTTTCAAGTGTTCACCAGCTACTGGTCATGGTCTAAATGTGACCGCTGTGACATCCAGGGGGAGCAGACGCGTGTGGGACTTTGTTATGTCAAAAGCATTTACCTCCATGTACGTTATCAGCATGAATCGGGTGCAGCGGCTTCCTGTGGTTCCTCAGCCGTTCCCCAACAGTTTGGACTTTCAGGCAGTGGCTACGGTGCCGAGCTTGAGGTGAGGAACTGCCACACCAGCTGTACTCCGAAACCTACAACATCTCCAGAGAGACAAGCTCTGCTGAAGTTCCTCGAGTATGATGATCGAGGTGTCACCATCCACTTCCACAACCACCCCACAGACTCTGATCTGGTCTTGACCTGTCCTGGCGCCAAACCACAGTACACTGTGGCCTGGGATAAAGGCTCAGCACCTCTTTATCGCTCACAGTATATGGAGGGTTTGAATAAGACGTCTCGCATCTTCATTGACACCGGTCACCACCTGCACTTCAGGCCTGTGCGTCTGGAAGATAAAGGCTCCTATTTCTGCTGGCTCCAAGGCGAGCTGGCTGCAGAGATCAGACTGGGGGTGTATCTGCGCTTGGGACGTTTGCGTCAAATCTCTGACCCGGAGTCTCTCTATGCACTACAAGTTATACTTGCTTGCTACATTGGCATTACAGCTATGTTTCTCTTGACTGTCTTAGTCAGATTTATTTGGCAGATAAGCAAGGAAGATACATTTGCAGATATTAACAGAACTTGAATGTGCATCAATTATACTGACGTATGTTTACTGTGAAGTGCAACGTGAAATTGAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_04595809_04598174.mRNA True 2045 mRNA 0.47 4 4595750 4598174

Neighbor

gene id symbol gene type direction distance location
CI01000069_04579172_04593867 NA coding downstream 1727 4578609 ~ 4594023 (-)
CI01000069_04574882_04576116 NA coding downstream 19622 4574366 ~ 4576128 (-)
CI01000069_04444787_04454292 NA coding downstream 141458 4444226 ~ 4454292 (-)
CI01000069_04387255_04404199 RARA, RARAA, RARAB coding downstream 191407 4386997 ~ 4404343 (-)
CI01000069_04380270_04382951 NA coding downstream 212799 4380172 ~ 4382951 (-)
CI01000069_04599199_04600481 RL23, RPL23, RPL23.L coding upstream 995 4599169 ~ 4600481 (-)
CI01000069_04603992_04607459 NA coding upstream 4925 4603099 ~ 4607586 (-)
CI01000069_04628032_04638137 SGSM3 coding upstream 29679 4627853 ~ 4638137 (-)
CI01000069_04692723_04695795 ELFN2 coding upstream 94318 4692492 ~ 4696567 (-)
CI01000069_04802439_04905601 CACNA1A coding upstream 203423 4801597 ~ 4905886 (-)
G276052 NA non-coding downstream 38086 4555209 ~ 4557664 (-)
G276042 NA non-coding downstream 67870 4527082 ~ 4527880 (-)
G275770 NA non-coding downstream 380060 4143168 ~ 4215690 (-)
G276064 NA non-coding upstream 15680 4613854 ~ 4624902 (-)
G276129 NA non-coding upstream 66996 4665170 ~ 4665413 (-)
G276133 NA non-coding upstream 71158 4669332 ~ 4669811 (-)
G276094 NA non-coding upstream 101097 4699271 ~ 4703469 (-)
G276114 NA non-coding upstream 105878 4704052 ~ 4710962 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 other downstream 788673 3804616 ~ 3807180 (-)
CI01000069_03768812_03787588 BRSK1 other downstream 826530 3765673 ~ 3787588 (-)
CI01000069_03415853_03417644 LIMD2 other downstream 1169376 3412973 ~ 3417644 (-)
G275699 NA other downstream 1517582 2992504 ~ 3078168 (-)
CI01000069_04932463_04940554 NA other upstream 341347 4932144 ~ 4941471 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026503 ccdc103 coding NC_007114.7 CM002887.2 33420214 ~ 33422738 (-)