CI01000069_04692723_04695795 (ELFN2)


Basic Information

Item Value
gene id CI01000069_04692723_04695795
gene name ELFN2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4692492 ~ 4696567 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_04692723_04695795.mRNA
AGATAAATGATCCCTATTCTGGAAAGCTAGTGCATGGCTCATTTACTACCATTTTAATGATTAAGAAATGAAATCCAAGGGTAGGGCACTATTTGTTCTTACAGCTAATGAATGATTTGTTGGGAAATGGTCCAAATTGCAGTGGGATTTTTTTTGGTCCAGATTTTATACAGGAGTTTACAGCAACCACTATGCACATATACACAGATTCATCCATTTATGCCAGCTTGTACCAGCTCATGTGCCATCTCATCACTGGCAGCATTGAAAATATGGACCAATTAAATTTTTGATTTAAGGCATACATAGATTTGAGTTACTCAAGAGTTACTGAATTGGCTTCCATTATTATGCAGAATCCATTAGTGAATGTTATTGTGTCGTGTTTTATGACTCATGTTTGTAGTGGCTACATATTCAGTTTTATAGTGATAAATAACCAAATGTGTTCTTTTAAAATTTGAGTTATGTTTTATAAATTTATATATGTCTTTTTTTATTATTTGACAGATTCATCAGAGAAGACTCCAGCAGCTGTCCTTCAAGTCAAGATCAATTTTGAAAATGTATCAGGCACTAACTCAGCTAAACCGGATATGAGCAAATATGGGGACTCTGTTAGAAACCATGGCAAGCCAACAGCTTTGACAGCCCAAAAGGAGATCCTTTTTTTGCATATGTGAAAGATATTTTTTGTACTGTCAATACCAAACTCCTAGAAGAATCCAACATTGTTTCCCTTTATTTTAAAACACCCCCTTCCACTCCAATCATGAAGAGTTTGTTGTCTGCCCTCACTCCTTCCTGTACCACCCTCCTCTTACTTCCCTTTTTCCTTCTCTTATGCCCACCAGCATTGGTCAGAGGTGACTGCTGGCTGATCGAGGGGGATAAAGGCTATGTGTGGTTGGCCATCTGCAGCCAGAACCAGCCACCGTACGAGACAATCCCACAGCACATCAACAACACAGTACATGACTTGCGGCTTAATGAGAACAAGATCAAAGCTATTTTTTTCACTTCCTTGAGTCGCTTTACAAACCTGACCGACCTCAACCTCACCAAGAATGAGATCTCGTACATCGAAGATGGTGCTTTTGCAAGCCAAGCAAATTTACAGGTCCTGCAACTTGGATATAACAAGTTAACCAACCTGACAGAAGGCATGTTGCGAGGTCTGGGACGTATGCAGTGTCTTTTCTTGCAGCACAATCTCATAGAAGTCATTGCCACTAATGCATTCTGGGAGTGCCCCAGCCTCAGCAACCTGGATCTGTCATCGAACAAGCTTGCCCGGCTGGACCCATCGACTTTCACTGTGTTGGGCAGGCTCATGGGATGTGAGCTTGCAGGAAACCCTTTCCACTGCGGATGTGAGCTCTACAGTTTCCTTACTTGGTTAGAGGTCTTCAACAATGTCACACACACCTATGATAGACTTCAGTGCGAGACCCCACGGGAGTTGTTTGGCTATCCATTGCTAAGTCCTGTTGCCGGGCATGGACGGAGTGCTCGCAACATCCTTTCCTCTGTGTGCCGGGATGGGGTGCTGATTCCTGGGATGACATCTCTTCCACCTGATTCTGATTCTTCAGGCATGGGACCTGACATGTTTGACCACATTGGACCATACCATCAGCCCACAACTTCCTCCTCATCTGACAATGCATTTAGTCCCAGCATCAAACTGCAACATGTGTCTCTTTCCTCTGCATCCCTTCTGATCCAGATTCCAAAGCCATACAGCAAAATGTACATCCTGGTACAGTACAATCAGAGCTTTGTGTCAGATGTAATGAACTTGAAGAATAAAAAGGAAATGATCACTCTTAATAAGCTCAAACCTAACACCAACTATACCTTCTGCGTGGCATCTATACGCAACTCACAGCGCTACAACCACACTTGTTTATACTTTGCTACCCGAGCTCCAAATCCAGATGACTTGATGCCTCCACCCTCCACGACCACCCACTACATCATGACCATTGTTGGCTGCCTCTTCGGAATGCTCATTGTTCTTGGGTTTGTCTATTACTGCTTACGAAGACGTCGCAGACAAGAAGAGAAAGAAAAATCCATCTGTGTGAAGAAAACCATTCTGGAAATGCGATATGGTCCAGAGGTGGCAGCAGCAGTTGCAAATGACCCCGCAGCTGTCCAGAAACTCCACGAGCAGAGCCACCATCAGCATCACCATGGAAAACTACCCATGTCCTCCTCGTCCAGCTCTGCCATGCTTGGCCATGGTTCTGCAAACACTAGTTCCTCACGTCTGTCCTCCATCCCTCAAGTAGAGAAGATGGCAACTGCTTTCTCTGAGGCCATGGCCACTAAGGGCAACTATATGGATATTAGGACCTCTGTGGGAGGAGATGAAAGGGGGAGAGATGGAGCTGTGATGCATGGTGTTAGGGAGGAAGACCTCAGGGGGGATGATGGGAGTGACCTGGGTGATGATTCAGATGATGATGGCCGGGGATCAGCATCCGAGATTTCAACCATTGCAATGGAAGTTGACAAGGTCAACCAGATAATTAACAACTGCATTGATGCCCTCAAGCTGGACTCTGTTGCCTCTACTGTTTCCACCACAGCAAGTGGTCCCACCTCACCCCCACCTACCTCTACCTCCTCCCTAACCAGAGGACTGATTCCCATCTCTACTAGTGTCAGTGATACATGCCAAGTCCTACCTTCTCCGAAAATCCCTCTTCCACCCCCTCTTCCCTTCTCTGCTCCTCTGTCTGAGAGACCTGGGATCACAGGGGGTGGCTTTGTGTCACCACCATATCGTCCACCACCCCCAGCTTCTGCAGTGAGGCCTATTCAAAGACAGATGAGTGCAGATGCAGCTGTCATCGTCTCTTCTTCCAAGAGGCACTGCCGCCCTTCCAGTGGGAAAGGAGGTCGTGTTTACAGCCTAGATGTTCCGGAACCCCACAGCCCAGATCCCTGCCAGTATCCAGACAAGGGCAGCCCATTGGGGTGTGGTGAGCCCCTGGAGAGGCTTCCTTTAGTAGGTAGTGGTGGAGGTGGTGGCTGTAGCATCGACGGTGGTACTGTAGACGGGATGGGCCTTCAGCAACACCTGGAGGTGCACCCAGACTATCACTGTGCAGAGCATCGTCACTCAGTCCCTGCCCTTTACTATGAGGGCTCTCATGACTCCCCGGCCCAAAGGGTCTCGTTTCTCAAGCCCCTGTCACGCACCAAGAGAGACGCTGCTTCCTACTCTCAGCTCTCTCCGCGTCACCACAATTACTCTGGCTACTCCTCGAGTCCAGAGTACTCCTCCGAGAGCACCTTGCGCATCTGGGAGCGCTTCCGTCCCCACAGAAAGGGTCCACGTGAGGAGTCATGTTACGTAACAGCCGGAAACGCCTTGCGCAAAAAGGTCCAGTTTGCCAAGGGGGAGGACTTGCATGACATCCTTGACTACTGGAAGGTGAAAAAGGTCCAGTGGGCTTATCATTTGTCAAAAATTGAAATAATTGTGTTTTACTCAGTATTCATCTGTGTATTCATCGTTCATATCAATAGTGAGACCTTTGTAACCTGAGCCCTTATTCAGCCTGAGAGAGAATCTCTGTTTATACTCCCACTCAAATCATTGGCCATCGCATTCATTTGTTAGGCGGGAATGTATATGAGTGTGTGTTTTAGGAGGATAAAATGATGTGCTGATTTTCTACAAACCTGTCAAAAGCAGTTTCCTCCTTCCATATTGCAGTGACTGTGCACAGGGCAACCAAATTTACATTTCAATAGCACTCCTCATGTGAAAAATAAA

Function

symbol description
elfn2 Predicted to enable protein phosphatase inhibitor activity. Predicted to be involved in negative regulation of catalytic activity. Located in extracellular space.

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description
K17568 ELFN2; protein phosphatase 1 regulatory subunit 29

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_04692723_04695795.mRNA True 3793 mRNA 0.47 2 4692492 4696567

Neighbor

gene id symbol gene type direction distance location
CI01000069_04628032_04638137 SGSM3 coding downstream 54355 4627853 ~ 4638137 (-)
CI01000069_04603992_04607459 NA coding downstream 84906 4603099 ~ 4607586 (-)
CI01000069_04599199_04600481 RL23, RPL23, RPL23.L coding downstream 92011 4599169 ~ 4600481 (-)
CI01000069_04595809_04598174 NA coding downstream 94318 4595750 ~ 4598174 (-)
CI01000069_04579172_04593867 NA coding downstream 98469 4578609 ~ 4594023 (-)
CI01000069_04802439_04905601 CACNA1A coding upstream 105030 4801597 ~ 4905886 (-)
CI01000069_04919538_04930550 GTF2F1 coding upstream 222452 4919019 ~ 4930550 (-)
CI01000069_04932463_04940554 NA coding upstream 235577 4932144 ~ 4941471 (-)
CI01000069_04942590_04973602 NA coding upstream 245844 4942411 ~ 4973663 (-)
CI01000069_04983344_04983640 IGHV4-2 coding upstream 286755 4983322 ~ 4983640 (-)
G276133 NA non-coding downstream 22681 4669332 ~ 4669811 (-)
G276129 NA non-coding downstream 27079 4665170 ~ 4665413 (-)
G276064 NA non-coding downstream 67590 4613854 ~ 4624902 (-)
G276052 NA non-coding downstream 134828 4555209 ~ 4557664 (-)
G276042 NA non-coding downstream 164612 4527082 ~ 4527880 (-)
G276094 NA non-coding upstream 2704 4699271 ~ 4703469 (-)
G276114 NA non-coding upstream 7485 4704052 ~ 4710962 (-)
G276071 NA non-coding upstream 94815 4791382 ~ 4792803 (-)
G276107 NA non-coding upstream 307812 5004379 ~ 5009473 (-)
G276193 NA non-coding upstream 362766 5059333 ~ 5059568 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 other downstream 885415 3804616 ~ 3807180 (-)
CI01000069_03768812_03787588 BRSK1 other downstream 923272 3765673 ~ 3787588 (-)
CI01000069_03415853_03417644 LIMD2 other downstream 1266118 3412973 ~ 3417644 (-)
G275699 NA other downstream 1614324 2992504 ~ 3078168 (-)

Expression


Co-expression Network