CI01000069_04776672_04785162


Basic Information

Item Value
gene id CI01000069_04776672_04785162
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4775370 ~ 4785432 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_04776672_04785162.mRNA
CTTTAAAAGGTTGTGCCCCGACACACACACACACACACCGTGATAACTATACCTAAGGTGTCCCTCTCCTCCCCCACCCCAAGGGAAAGCTTCTTAAATAAACCCTGGGCCTCTCAGTGTGTATGTGTGCCACTGCTCTCTGGCCAACTGTAAACAAGCCGTTTTGTCTGATGTCTATGGCTTGTGTGTGCGCATGCAAGGGAGGGGGGGAGCGAGCCTGAAGTCAGACAAAGAGGGTACTTCTTTTACCACGAATGTCCTGTTAGTTCTGTGTGATCAGATCAGATTCAGTGATTTTTAATGTGATGGCTTGTGTGGGAAACATGTGCCCAGATGTTTTGCCTACCACTGTCTAATCTTAATGTGTGAAGTATATCACATCCCAGTGTTATTCTGTCGTGTTGGTTTAGCTGACATGATTTGAGGGCTGATTTTACTTCACCGAATGAGTGCTGAACAATAAGCCACGATCTTTCTGTTGACGGCAAAATGTCAGTCCGTACCCTTACAGAAAGTTCTGCTACTCGTTCTGCTGAAAATATTCGCCCTCCTTCCCCAACAAATATAAGTGTATTTGTTGCTTAAAAAGGAGGGAATTGTAAAGACCAGTTTTAAAGTCTGTATACCTGTAACATGGTGGACAGCCTATTATATAGTAGAAAGTTCAGGTTATAATGAATTTCCCCAGCAGCACGGCTGTGAGCTGTAATGATGGCTTTGCTCATGGTGTCACATTTAGCAGTAATAAGACTGACTGCACTGTCAGTCAAAGCCCATTGTTTTCCACCCTCTTCCTCAACTATGACCTCAATCACTGGTTTAGTATCTCTCTCTCGCGCTCTCCCCCTCTCTCCCTCCCTGATGTAGTACTGTAAAGAGTGCCATTTTATCTCTGTCTCAGCTGAATCACCATCTCATTCAGATTAGCAGTCACATCCTGCTCACAGGATTTTAGAGGCGGCTCGCCAACCCCCCCTATTATTTTTCAGAGTTTGCATGTTTTAGGCCAGTCTGCTAAAGGTGCCTACAGGCTCGTCCCTGGGGTCTTATACGTTTCACCTTTTAATATAACAGTCTGTTGCCAGTAACCGTTTGTGTCTTTGCAATAAATTGTGTTTGATTCAGTGGATTTTACTGCTTCAAAAGCAAATGATGGTTGCAATGATTCTTAAGGGATGAACTACTGTGCTACTGAGAGAATGCTGCTGACAAAGATCTCTTTCTTTCTCTTCCATCTGTCTTTCCCTCCTTCTCTTCCTCCGGTGCCGCTCAGATTTCTCTGGTGGTGCTGGCCATAGCGCCATGGCTCAGACCCTTCAGATGGCGATCCCAAACTTCGGCAACAATGTCCTGGAGTGTTTGAACGAGCAGCGGCTACAGGGCCTGTACTGCGACGTGTCCGTGGTGGTGAAAGGGCACACCTTTAAAGCTCACCGTGCCGTGCTGGCAGCCAGCAGCTCCTACTTCCGTGACCTTTTCAACAGCAGCGCGGGCAGCAAAACCCCTACGGTGGTGGAGTTGCCTCCGGCCGTACAGCCGCAGAGCTTTCAGCAGATCCTGGCCTTCTGCTACACCGGTCGCCTCAGCATGAATGTCGGAGACCAGTTTCTGCTCATGTACACGGCTGGCTTTCTCCAGATCCAGCAGATTATGGAGAAGGGCACAGAGTTCTTCTTGAAGGTCAGCTCGCCCAGCTGCGACTCACAGGGCCTCCATACTGAAGAAACTCCTCCGTCGGAGCCTCAGAGTCCCGTCACCCAGACAGCGGCAGGGGCCGCGGCAAATGGAGGAGGTGGGGTGGTGGCTACGGCAGCCAGTCGGCCCACTTCCTGCTTGACCCCGTTGCCTCTGGTGTCTCGGGTGAAGACAGAGCAGCCGGAGGCTTCGCCCTATTCTGTGGTGTGCACGCCGGTGGCCAAGCGGCTCTGGGAAGGAAGCAATCGGGAAGGCGGCGGAGGCTCTGGCACAGCCGGAGGAGGAGGGATGAGGAAGGCGGCCCGGTTTTCCCAAGAGATGGCACGTGGAAGCGCCATCCAGCAGCAAAGTAGCATGGGACTTGGTATGGGTCTTGGAATGGGCACGGGGGGTCACAGTGGCAGCAGCAGCACCAATGGCAATGGCACGAACAGTGCCACTCCTGAAGGCACCAGCCCCGGTACATTGAGTGCCTATGCCAGCGATTCACCCATCTCTTACCATGACGATGAGGAAGAGGAAGAGGCGGTGGATGATGGCACTGAAGAGCAGTACAGGCAGATCTGCAACATGTACACCATGTACAGCATGTTAAACGTGGGAGCTACAGACGGCATGAAAACTAAATGTGTTCTGATGCCTTTGGATTTCACAGGTCTTTTATTAGTCTTGGTCCCAAGAGCGGGCGAGCGTGTGGAGGCCCTCCCGGACCACTCAGAGACGCGGCCTAGGATGCGCGGCCGACAGGATCTCGCCTCTCTCCCTGCCGAGCTCATCGCTCAGATCGGCAACCGCTGTCATCCTAAACTTTACGAGGAAGGCACCAGCGTGTACATTTCACGAGCTCAGCTGATGAACTGTCACGTCAGTGCAGGGACCAGACACAAAGTCCTTCTGAGGAGGCTGCTGGCTGCTTTCTTCGATAGGAGCACTCTGGCCAACAGTTGTGGAACCGGCATCCGTTCCTCCACCAATGACCCCAGCCGTAAGCCGCTGGACAGCCGAGTGTTACACGCAGTCAAATTTTACTGCCAGAACTTCGCCACCAGCTTTAAGGAGAGCGAGATGAACGCCATTGCAGCGGACATGTGCACTAACGCTCGGCGCGTGGTGAGGAAGAGCTGGATCCCCAAGCTGAAGCTACTGATGGCGGAAGGCGACGCCTATGCCAATTTCCTTCCCGACAGCATCAAGATGGAAGCGGACGGCCTTAGTGGCGAGCCTACCTTTGAGACCGCAAGCCTGGAGGGTGGCACTTCGGTGGAGACCGGAGGATCCTCGGGCGAGTCTCTGCAGGGTGTGGGCGGAGACAACGGCACTTTGTTTCAGTGAGCGACCCGGCAAGGAAAGCCCTGCCCCATCCCCTCTGCCGCCCCACCTCCTTCCCGCCTCCCACACCGCTGCGTGACTCTGGGCTCTGCTGCTTTTGCCTAGGATGGGAAAGGGAGAGTCGGGTAGGAGATTGGAGGAGATAGCACGGTCTAGTGTCGGGAGGAACACGGGGGTTTATGCCAGGGGCGCCATTTTCTTTTCAATCATTTTTGTTTTTGCTGAATAACCCTTTTTTGCACAGAAGATCCCCTTTGCCTCCATGCTCGGCAA

Function

GO: NA

KEGG:

id description
K10486 BTBD14; BTB/POZ domain-containing protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_04776672_04785162.mRNA True 3297 mRNA 0.53 6 4775370 4785432

Neighbor

gene id symbol gene type direction distance location
CI01000069_04773976_04774606 NA coding upstream 411 4773976 ~ 4774959 (+)
CI01000069_04612170_04623197 GTPBP1, GTPBP1L, GTPB1 coding upstream 151919 4612170 ~ 4623451 (+)
CI01000069_04562461_04568806 MPP2A coding upstream 206474 4562461 ~ 4568896 (+)
CI01000069_04556116_04558002 PYY, PYYA coding upstream 217013 4555269 ~ 4558480 (+)
CI01000069_04527086_04527715 NA coding upstream 247556 4527001 ~ 4527814 (+)
CI01000069_04791495_04792375 NA coding downstream 5919 4791351 ~ 4792680 (+)
CI01000069_04917103_04918567 ALKBH7 coding downstream 131671 4917103 ~ 4918901 (+)
CI01000069_04981836_04982608 NA coding downstream 195527 4980959 ~ 4983096 (+)
CI01000069_04990240_04994522 ALDH3B1 coding downstream 203303 4988735 ~ 4994869 (+)
CI01000069_05002707_05021316 CARM1.L, CARM1P1.L, CARM1 coding downstream 217275 5002707 ~ 5023082 (+)
G274938 NA non-coding upstream 7623 4767532 ~ 4767747 (+)
G274937 NA non-coding upstream 8230 4766922 ~ 4767140 (+)
G274897 NA non-coding upstream 79298 4685176 ~ 4696072 (+)
G274893 NA non-coding upstream 104267 4670589 ~ 4671103 (+)
G274626 NA non-coding upstream 173352 4599124 ~ 4602018 (+)
G274948 NA non-coding downstream 43316 4828748 ~ 4831017 (+)
G274964 NA non-coding downstream 50138 4835570 ~ 4839648 (+)
G274976 NA non-coding downstream 62590 4848022 ~ 4851034 (+)
G274977 NA non-coding downstream 68901 4854333 ~ 4854569 (+)
G274967 NA non-coding downstream 69974 4855406 ~ 4855607 (+)
G274619 NA other upstream 641992 4129128 ~ 4133378 (+)
G274603 NA other upstream 971869 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1880482 2893418 ~ 2894947 (+)
G274953 NA other downstream 139035 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 260795 5045967 ~ 5049408 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025518 nacc1a coding NC_007114.7 CM002887.2 33745014 ~ 33754115 (+)
eurasian perch (Perca fluviatilis) G45451 rbm15b,LOC102788268 non-coding NC_053115.1 CM020912.1 42656266 ~ 42656676 (-)