Gene
RNA
| Item | Value |
|---|---|
| gene id | G275876 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000069 |
| NCBI id | null |
| chromosome length | 5329268 |
| location | 3357221 ~ 3357421 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312972 | True | 201 | lncRNA | 0.41 | 1 | 3357221 | 3357421 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000069_03315611_03353645 | KCNH6, KCNH6A | coding | downstream | 3488 | 3315512 ~ 3353733 (-) |
| CI01000069_03298533_03302831 | CCDC47 | coding | downstream | 54390 | 3298197 ~ 3302831 (-) |
| CI01000069_03242808_03248880 | NA | coding | downstream | 108341 | 3241819 ~ 3248880 (-) |
| CI01000069_03032171_03032924 | NA | coding | downstream | 324297 | 3031990 ~ 3032924 (-) |
| CI01000069_03027056_03028752 | APNL | coding | downstream | 328469 | 3026925 ~ 3028752 (-) |
| CI01000069_03365921_03371931 | GFAP | coding | upstream | 8042 | 3365463 ~ 3371944 (-) |
| CI01000069_03382399_03395900 | MAP3K3 | coding | upstream | 24711 | 3382132 ~ 3395900 (-) |
| CI01000069_03415853_03417644 | LIMD2 | coding | upstream | 56704 | 3412973 ~ 3417644 (-) |
| CI01000069_03430311_03432182 | NA | coding | upstream | 72862 | 3430283 ~ 3432207 (-) |
| CI01000069_03433325_03435163 | NA | coding | upstream | 75866 | 3433287 ~ 3435275 (-) |
| G275772 | NA | non-coding | downstream | 44325 | 3306489 ~ 3312896 (-) |
| G275814 | NA | non-coding | downstream | 73030 | 3280912 ~ 3284191 (-) |
| G275856 | NA | non-coding | downstream | 95717 | 3261296 ~ 3261504 (-) |
| G275843 | NA | non-coding | downstream | 137180 | 3219809 ~ 3220041 (-) |
| G275658 | NA | non-coding | downstream | 462255 | 2892738 ~ 2894966 (-) |
| G275878 | NA | non-coding | upstream | 3067 | 3360488 ~ 3360701 (-) |
| G275750 | NA | non-coding | upstream | 238300 | 3595721 ~ 3627754 (-) |
| G275826 | NA | non-coding | upstream | 250031 | 3607452 ~ 3614839 (-) |
| G275754 | NA | non-coding | upstream | 255332 | 3612753 ~ 3636263 (-) |
| G275828 | NA | non-coding | upstream | 256897 | 3614318 ~ 3633114 (-) |
| G275699 | NA | other | downstream | 279053 | 2992504 ~ 3078168 (-) |
| CI01000069_02997434_03008924 | NA | other | downstream | 356788 | 2997275 ~ 3008924 (-) |
| CI01000069_02589498_02621318 | SYT3 | other | downstream | 726905 | 2589469 ~ 2621641 (-) |
| CI01000069_01645966_01647142 | NA | other | downstream | 1709895 | 1644522 ~ 1647326 (-) |
| G275178 | NA | other | downstream | 2411417 | 926923 ~ 945804 (-) |
| CI01000069_03768812_03787588 | BRSK1 | other | upstream | 408252 | 3765673 ~ 3787588 (-) |
| CI01000069_03804630_03807180 | PRMT1.S, PRMT1 | other | upstream | 447195 | 3804616 ~ 3807180 (-) |
| CI01000069_04932463_04940554 | NA | other | upstream | 1582100 | 4932144 ~ 4941471 (-) |
