CI01000070_01288997_01292086


Basic Information

Item Value
gene id CI01000070_01288997_01292086
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000070
NCBI id null
chromosome length 4890654
location 1288900 ~ 1292211 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000070_01288997_01292086.mRNA
ACATAAAAGACTGCATAAGTAGTGTGTTTTCCGTACACAATAGGGGGAGGGCGTGTCTAATTTAAGGGTTGACCATATCCTGCATCTTCTCCGTCCCATGACCAGGGTCCCAATCTCTCATCTTCTAGAGATGGCAGAGGGCTGGTCGTCCAGCCGTGGCACAGGCCCTTCCCTTCTTTTTCAAGTCATCTCCGTCCGTAATGACCTCCTCCACGGCCCATCCATCAGCTGGCAATTACAACATCTGTCGCGGATGGCTCGGGCGAGTCTTTCCTTCGCACCGGATCCCCCTCGATTATGTCCGCCACTGAAAAGGATAATGCCTTTTCAATCTCGTGGTGGGATGACAGTGTGGGACCGTGCCTCCTTTTCTCTTGGCCCTTTAAGAAGAGCGGCGGATAGATGGCATGACATCACGGGCAAAGCCGGGAACACAATGCAAAGCTTTGAAGCCTTGTGGGTGTTTGAGGTTCAGAAAAGGCTTGTGGAGAAAATAACACAAATAAGCCAGTTATCTCTGTGGAAAACCAACGACGAACGCAGAGTCTTTCTTTATCTCTTTCTCTGCACAGTACTTTGGCTAGATGCCGCAGCTATTAGTACCCTCTCCGATGTCTCATAAGGTACTTCCGCTGCCTGTATTGTTCTCAGATTTAACTTTGCTGCCTGAATCCGGGACACTATATGGACCGCTATCTGCACTGCCCTTGTTTTTTTTTTCAGTTTCTGCATGCATTTTTAGAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000070_01288997_01292086.mRNA True 747 mRNA 0.49 3 1288900 1292211

Neighbor

gene id symbol gene type direction distance location
CI01000070_00857832_00889186 C3ORF58, CSGR08H3ORF58, C20H3ORF58, CLG9H3ORF58, CLG20H3ORF58, C8H3ORF58, DIA1A, DIA1B, C10H3ORF58, CUNH3ORF58, C3H3ORF58, CLG14H3ORF58 coding upstream 399483 856513 ~ 889417 (+)
CI01000070_00763075_00764472 CHST2, CHST2B coding upstream 523944 761784 ~ 764956 (+)
CI01000070_00621764_00643105 PCOLCE2B, PCOLCE2 coding upstream 645465 621764 ~ 643435 (+)
CI01000070_00585685_00592670 ACBD5, ACBD5A coding upstream 695900 585634 ~ 593000 (+)
CI01000070_00532416_00535448 NA coding upstream 752952 532372 ~ 535948 (+)
CI01000070_01385458_01389948 ZIC1 coding downstream 92468 1384679 ~ 1390024 (+)
CI01000070_01560169_01561248 AGTR1B coding downstream 267742 1559953 ~ 1561501 (+)
CI01000070_01567837_01572943 CPB1 coding downstream 275626 1567837 ~ 1573021 (+)
CI01000070_01585549_01586715 NA coding downstream 291446 1583657 ~ 1586725 (+)
CI01000070_01822353_01824092 FZD8A, FZD8, FZD8.S, FZD8.L coding downstream 530009 1822220 ~ 1824599 (+)
G276714 NA non-coding upstream 17707 1198988 ~ 1271193 (+)
G276708 NA non-coding upstream 100276 1184966 ~ 1188624 (+)
G276694 NA non-coding upstream 130192 1157313 ~ 1158708 (+)
G276629 NA non-coding upstream 202709 1005199 ~ 1086191 (+)
G276560 NA non-coding upstream 433243 853143 ~ 855657 (+)
G276781 NA non-coding downstream 27547 1319758 ~ 1397418 (+)
G276785 NA non-coding downstream 109809 1402020 ~ 1403470 (+)
G276786 NA non-coding downstream 111408 1403619 ~ 1406636 (+)
G276784 NA non-coding downstream 119562 1411773 ~ 1413442 (+)
G276783 NA non-coding downstream 121737 1413948 ~ 1415631 (+)
G276678 NA other upstream 162447 1126004 ~ 1126453 (+)
G276782 NA other downstream 115583 1407794 ~ 1410138 (+)

Expression


Co-expression Network