CI01000071_01374449_01376813


Basic Information

Item Value
gene id CI01000071_01374449_01376813
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1373996 ~ 1377670 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000071_01374449_01376813.mRNA
GAATAAAAGAGAAAGTGAAGTACAGAGAAATGATCATAGAAACAGGCCAACGAAGAAAAAAATCACAAAGAGAAAGAAGCGAGCAGAGGTTTAATATAGAGAAACAAAGAGATGAATAGACTGAAATAAAGGATCGGAATATCTGAAAATGTACAGGTTTTATACACAGTCTATAGTTAAGTCTAGCTGATATTTAATAATACTATTTAATAACTAGTATCAGAATGATATTATGGACTACTGTGATATGTGTGACATTGCAGCCACATCTTCATCTGTAAGTACTTGCAGTCTTTTTTTTTTTTTTAATGAAATTTAACATGGAGGTTTGAAAATCTCCCATTGACATTAGATTGTTCAGTATTCAAATGTGATTTATGATGTCATAATGGGCCTTCTTTTCCATTTTTGAATCACCTTTCCAATCACTCAAACGCTTTTCTTTTGCTGATCATGAGGAGATTCAAAAATAGTTTAAACGTTTATCAGCAGTTTTTATATGGTCATAAAATGGACCTCAACATTAGTTTGCCGTTATTTGCTGACACTGCTGCAGACTGTTCGCGATCAAGTAGAAGGCTCAAAGCAGGAAGTCGACTGAAATCTCGACAGTTGCGCAGTGGACGCAGAACAGACACCAGTCGCTCCTGTGGTTCAGTCTCCTCTTTATCCTCCATTAGCAGACCTCTTCTTGGCAACTTTGAGGAGTCAATTCTGAAGGGCCGCTTTACTCCATCTGGGCGGATAGAGGGCTTCACAGCAGAAATCGGGGCTAGCGGCTCCTATTGCCCACAGCATGCCACCTTACCTGTGCAAGTGACATACTATGACACCTCAGAGCACAGTGCCCCTTCTCCCTTCCTGACCTTATTTAACCCCAATAAGACTGTGGTTAAAATGTTTTTGGTGACGTATAATTTTGGGGACATGCCCGTTAATCACATGACCTTCTTGCGCCATCGTATCTTCCTGGTGCCTGTGGATGAGGTGGAGGGGCCAGGGGAGGGGCAGGAAGGCTCCTTGTCTGACAGGAAGAAGATTCTCTGCTACTTGATACACCTCAGATTCCAGAGTTCCAAATCTGGGAAAATCTACTTGCACAATGATATCCGGCTGCTATTCTCCCGCAAGTCCATCGAGGTGGACACTGGGATTCCTTACGAGCTGAAATCTTTCACCGAGGTGCCAAGAAACCCCAAATACTCCCCCAGAGTGTGAGATCGTGATGCCCTGCTACGGTGGGGAAGAAGGACTGCATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000071_01374449_01376813.mRNA False 1260 mRNA 0.43 6 1373996 1376855

Neighbor

gene id symbol gene type direction distance location
CI01000071_01139373_01146663 FOXN4 coding upstream 227318 1139064 ~ 1146678 (+)
CI01000071_01113148_01115596 KCTD10 coding upstream 257274 1113148 ~ 1116722 (+)
CI01000071_01086147_01088260 NA coding upstream 285597 1086147 ~ 1088399 (+)
CI01000071_00971517_00971823 NA coding upstream 401779 971037 ~ 972217 (+)
CI01000071_00965582_00968758 NA coding upstream 404635 965001 ~ 969361 (+)
CI01000071_01380924_01388813 RANBP1 coding downstream 3703 1380558 ~ 1388948 (+)
CI01000071_01392755_01411463 GOLGA3 coding downstream 15900 1392755 ~ 1412681 (+)
CI01000071_01416847_01427453 ANKLE2 coding downstream 39559 1416414 ~ 1428798 (+)
CI01000071_01436960_01442221 POLI coding downstream 60105 1436960 ~ 1442520 (+)
CI01000071_01443137_01445109 BRI3BP coding downstream 66282 1443137 ~ 1445166 (+)
G280676 NA non-coding upstream 3017 1357275 ~ 1370979 (+)
G280662 NA non-coding upstream 67854 1305898 ~ 1306142 (+)
G280646 NA non-coding upstream 91573 1280535 ~ 1282423 (+)
G280628 NA non-coding upstream 130476 1243296 ~ 1243520 (+)
G280614 NA non-coding upstream 166422 1207275 ~ 1207574 (+)
G280695 NA non-coding downstream 89393 1466248 ~ 1517469 (+)
G280705 NA non-coding downstream 119508 1496363 ~ 1496634 (+)
CI01000071_01514470_01525572 NA non-coding downstream 145136 1514315 ~ 1528807 (+)
G280740 NA non-coding downstream 354276 1731131 ~ 1731351 (+)
G280443 NA other upstream 451900 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 570679 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1427789 2815127 ~ 2835525 (+)
G282080 NA other downstream 1679229 3056084 ~ 3056531 (+)

Expression


Co-expression Network