CI01000071_02815324_02834097


Basic Information

Item Value
gene id CI01000071_02815324_02834097
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 2815127 ~ 2835525 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000071_02815324_02834097.mRNA
GTTTATATAGAAAGTAAATCATATCAATTTTGATTTCACACACTTTAAAGATGGCTGTATAAAGATGATATGGGTTGAAAGATAAACTTCACGATGGCCATTAGTGATGTAATTCTTATTAATTTACATAATTTTCTCAACTCTTTTTCCCTCTTTCTCTATGTCTACGCAGAGCTCACCGTGTTGCTGGTAGAGTCATGACCCTGAGACAAGCCAATGGCTGCAAACAGCTGACCTTGACCATTAGCCTGACCCTGACTCTAGGCCTGCTGCAATGGCCAATAGGAGATGTTAGTGGTCAGGATGGACTGTCTCCTGCTCAAGTCCTTCAGGAGCTGCTGACACGCTATGGTGACAACACCAGCATCTCTGTCCCTCAGCTTCGATCGCTCCTCATTCGGTTAAATGGAGGGCAGAGTGGAGAACATGACGCACAAACACAGCCCACCAAAACCAATGCATCTAAGTGCTTGGCTGCAGACACTCTGGCAGCGTATGGGATGAGCGAACAGTCTCGTATAGATGAACGAGGCCTGCAGGAGATCTGCCCTACCATGATACAGCAGTTGGACTCACAAGCATGCAAGACCCAACAGGACCAAGAGTCCGAGACCAGCCCCAGACCCACTTACGCTGAGGAATTTGGGAAGATTGAGGTGTTCATTTGGAGTCCCAAAAACGAAAAAGAAAAGAAAAAAGAAATGATATCTCTGTGTTCACTGGTCGGGGCGAGTGTGGTTCCCTTCATGAGGAAAACCTTTTACAAGCGGTTGCTGCTGTACTTCATAGCCCTGGCCATTGGTACTCTGTACTCCAACGCCCTCTTTCAACTAATCCCAGAGTTTCCAGAGATGAACGAGGTGAGTCGTGAAGAAGAGGAGGCCGGAGGAAGTGGCTCTCTGGTCACTTTCGCCATCCAGAACGCAGGACTGCTCACAGGATTTGCTATCATGCTTCTACTCACCATCTACTCTGGACAGATACAGCTTGGATAGCAGAGGACTTAAATACAAACTTAGACCCTGAGGGACTAACTCAGCACCTGGACTTAAACCTGAGACCTACTGGAACCTCCAGACTTAAATATGAGCCAGCTGTGCTGGCTTGTTTTAAAATGTTTGCCCAGCTGGACTAGGTCATGATGACATAAATTGAAATCTTATGGGCACAAACCCTGGACTGTTTGAATGAAGCTAGAATTAACTGACTTGTGAATTTTGCTTTAAATTCATCCAAAACCCAGACCTATGGATGGATGCTTTACCATTCATCTAGTTTAGGCCTTCTCTCGTTCTTTTGTCTCAAAGCTTTAGGACACAATGTCCCTGTACTGAGTGGATTCCAGTACCCTAACATGTACATCTGGGTAATTTTGTATTGATTTCTATGTTCTAATGTTAATTTTTTTTCAACAAAAAGTCTCTTTCTTTCGGAGACAGAGCACCTTTGTATTCCCGACCATGAGGATTAGAGTATTGTCCACTGACTGACATGTAACAGATGGGATAAAACTTGACTCATTTTAATGACATTTGGTCAAATGCAGGTTGTTTCTGATGCTTCAAACCAAATGGTTTTGTTTATTCAATAGAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000071_02815324_02834097.mRNA False 1597 mRNA 0.44 5 2815127 2834699

Neighbor

gene id symbol gene type direction distance location
CI01000071_02770135_02797577 PIWIL2 coding upstream 17354 2769237 ~ 2797773 (+)
CI01000071_02656286_02658917 ATAD1A coding upstream 156030 2656286 ~ 2659097 (+)
CI01000071_02539510_02615505 GALNT9 coding upstream 198834 2539183 ~ 2616293 (+)
CI01000071_02417387_02420895 NA coding upstream 393830 2416030 ~ 2421297 (+)
CI01000071_02329452_02331682 NA coding upstream 483096 2329232 ~ 2332031 (+)
CI01000071_02838185_02847470 NA coding downstream 3449 2838148 ~ 2847611 (+)
CI01000071_02927971_02953988 NA coding downstream 91950 2926649 ~ 2954167 (+)
CI01000071_02960341_02966088 COQ5 coding downstream 125338 2960037 ~ 2966446 (+)
CI01000071_03016024_03022596 NA coding downstream 179971 3014670 ~ 3022994 (+)
CI01000071_03062277_03064334 XBP1 coding downstream 227139 3061838 ~ 3064706 (+)
G282014 NA non-coding upstream 14346 2800542 ~ 2800781 (+)
G281992 NA non-coding upstream 54073 2760821 ~ 2761054 (+)
G281989 NA non-coding upstream 59650 2755218 ~ 2755477 (+)
G281988 NA non-coding upstream 65678 2749220 ~ 2749449 (+)
G281966 NA non-coding upstream 110316 2704591 ~ 2704811 (+)
G282075 NA non-coding downstream 216421 3051120 ~ 3051524 (+)
G282076 NA non-coding downstream 217082 3051781 ~ 3052472 (+)
G282082 NA non-coding downstream 223615 3058314 ~ 3058519 (+)
G282089 NA non-coding downstream 233906 3068605 ~ 3068899 (+)
G282093 NA non-coding downstream 237321 3072020 ~ 3072255 (+)
CI01000071_01374449_01376813 NA other upstream 1437457 1373996 ~ 1377670 (+)
G280443 NA other upstream 1893031 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 2011810 791346 ~ 803317 (+)
G282080 NA other downstream 221385 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 5341 2815127 ~ 2835525 (+)

Expression


Co-expression Network