CI01000071_04982029_04982493


Basic Information

Item Value
gene id CI01000071_04982029_04982493
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 4981356 ~ 4982540 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000071_04982029_04982493.mRNA
GTATTAAAAAAAATGTTCTAGAACCAGTAAACCATCAGTATGAGGGTTGGGACGACCCTTCAAAGGAGTATCAAGACCTTTATAAACTTTGGGCAACGTGTGGTGTAACTGGAAATTAGACCTTACGAAATTCATACTCATTTTTACTAAATTCACCACTTCAAAATGCAGCTGTAGCTTAGAATGTATACACATTTTTAATTTATTTGTGGGATCAGCAGGTAAACGTTCATAAAAGACATGTTCATCCAGTTGTCTGCAAATCTCTTTTTTTATAGCCTGAAACTCTTTGTAATAAAATCGCCCCACCCTTCTCTGCAGGACACACTTCCATGGAACTGTCTTTACTAAGTCTCTTCATGACTTGCTTGTCAAATCTGAATTTCCTTCCCATGAAAACAAGGCATTCCGATTCTTCCCCCAGGTAATTATAGGTGTTGCAATTGCACCCAGTGTGCTTTCACACACAAATGCCGTTTTTTTAAATTAATCAAAAGTGCCCCTCTCAGACAAATGGCAATGATAATATTGTGGTCAATAAAACGAAATGCATTTAAATTATAATTAACATAAAAGGGTAAATAAATTCATTAGTCAAATTATACATCCGGACCAAACTGGATTTATCCCCGAGAGATATTATGGAGATAACCTTCGCAGAACGTTAAATATTATGAGCTATACAAAATCGATAGGTGCAAAGGCTCTGTTCTTATCACTTGACGCTCAGAAGGCATTTGATCAGGTATCCTGGCAGTATCTGATCCAAACACTTAAACGGTTTAAATTTGGCCTCAATTTCATAAAGTGGGTTCAAGCTCTCTACACAAACCCACTTGCCTCAGTGAGAGTTAATGGTTGCAGATCCGGGCGCTTTACTCTAGAACGTGGATATAGACAACGATGTCCATTGTCACCCTTGCTGTTTGATATCAGCATCGAACCCCTTGCTCAACTCATACGGGATGACAGCGCAATTAAGGGAATTGTAATTGGAGGAGAGGAACATAAGTTGTCGTTATATGCTGATGATGTCCTACTCTTTCTAACAGAACCTGAGACAACAATTCCATATTTAAAAAAGCTCATTTTAAAATATGGCTACTACTCTGGAATATGGATAAGTGAATATGGATAAAACTGAGGCCATAGATGTTAATGGTCAAATTTCAAAACAAATCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000071_04982029_04982493.mRNA True 1185 mRNA 0.37 1 4981356 4982540

Neighbor

gene id symbol gene type direction distance location
CI01000071_04903716_04959830 KSR2 coding upstream 21495 4903716 ~ 4959861 (+)
CI01000071_04851502_04865548 KSR2 coding upstream 115808 4851502 ~ 4865548 (+)
CI01000071_04834539_04839129 WSB2 coding upstream 142001 4834326 ~ 4839355 (+)
CI01000071_04825708_04831021 NA coding upstream 150289 4825708 ~ 4831067 (+)
CI01000071_04780189_04798898 AIFM3 coding upstream 182458 4780189 ~ 4798898 (+)
CI01000071_05002535_05056745 NOS1 coding downstream 19649 5002189 ~ 5057408 (+)
CI01000071_05081168_05081463 NA coding downstream 98628 5081168 ~ 5082153 (+)
CI01000071_05082669_05087793 NIPSNAP1 coding downstream 99760 5082300 ~ 5087817 (+)
CI01000071_05102723_05110135 GATSL3 coding downstream 120183 5102723 ~ 5110220 (+)
CI01000071_05142025_05161947 RNFT2 coding downstream 159485 5142025 ~ 5162294 (+)
G283422 NA non-coding upstream 11167 4969068 ~ 4970189 (+)
G283423 NA non-coding upstream 15915 4962938 ~ 4965441 (+)
G283442 NA non-coding upstream 157568 4822773 ~ 4823788 (+)
G283440 NA non-coding upstream 163127 4817956 ~ 4818229 (+)
G283457 NA non-coding downstream 55 4982595 ~ 4989704 (+)
G283557 NA non-coding downstream 82092 5064632 ~ 5064913 (+)
G283580 NA non-coding downstream 83251 5065791 ~ 5066007 (+)
G283570 NA non-coding downstream 131057 5113597 ~ 5115165 (+)
G283577 NA non-coding downstream 162222 5144762 ~ 5196867 (+)
G282080 NA other upstream 1924825 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 2152752 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 3603686 1373996 ~ 1377670 (+)
G280443 NA other upstream 4059260 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 4178039 791346 ~ 803317 (+)

Expression


Co-expression Network