CI01000071_05081168_05081463


Basic Information

Item Value
gene id CI01000071_05081168_05081463
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 5081168 ~ 5082153 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000071_05081168_05081463.mRNA
ATGTCTAGGAACCCAATGCAGTCAGCGGGATGCTTCGCCATTCTAAAATCTGTTCAAGCAAACCCAGAATCTGCAGTTGAGTTCTTGGACTTCTCTGACATTTGCGTGGACCAAGAATTTGAAGACTTATTCAACAGCACCAAAGAAACACTCCCAAACCTCCGAGTGAAACAGGGTGGAAAAATGAATGCTGCATTTAAAAAGAGCTGAAATTTATTCAAAAAAAAACAACAAAAAAAAACATTGTGGACAATCCATATAGGCATATAGAACGGCAAATGTATTTTTGAACTTGCATACAACTGAAACTAAACTGATTTGAATCTAGCCTCACACTCCTCCACATGGAAAATTGGATCAAGTCATAGTTGATGGATCATGGTTTCTGGCGTTAAGGGAACAAAAGTTCAGTAGAATGATGTTTAGAAGAGGATTTGATGGCATTAGTGACCTTAGGCTTTAAAACATATCTTACAAAATGGGTATTGACATGATGTGAGGAGCAATGACAAGCTAGACTTTGTGTAAAATCATTGTAAACAACATTTACCTAATTCTTTTTATACTACACTACCGTTCAAATGTTTGAGATCTTTTTTTGAAAGAAGTGTCTTATGCTCACCTAGACTGCATTTATTTGTTCAAAATACATTATTAAATATCATTACAAGTGTTTCATATTTAAATAAATTGCAGTATATTTATTTCTGTGATGCAAAGCTGAATTTTCAGCATCATTTCTCCTGTGTTCAGTCTCATATTATCCTTCAGAAATAATTTTAATATGCTGATTTCAAGAAACTTTTATTATTATTATCAATGTTTAAAACAATTGTTCTGCTTAAAATGTTTGTAGCATCAATTATTGTAACTTTGATCAATTGAATCCTTATTTGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000071_05081168_05081463.mRNA True 900 mRNA 0.33 2 5081168 5082153

Neighbor

gene id symbol gene type direction distance location
CI01000071_05002535_05056745 NOS1 coding upstream 23760 5002189 ~ 5057408 (+)
CI01000071_04982029_04982493 NA coding upstream 98628 4981356 ~ 4982540 (+)
CI01000071_04903716_04959830 KSR2 coding upstream 121307 4903716 ~ 4959861 (+)
CI01000071_04851502_04865548 KSR2 coding upstream 215620 4851502 ~ 4865548 (+)
CI01000071_04834539_04839129 WSB2 coding upstream 241813 4834326 ~ 4839355 (+)
CI01000071_05082669_05087793 NIPSNAP1 coding downstream 147 5082300 ~ 5087817 (+)
CI01000071_05102723_05110135 GATSL3 coding downstream 20570 5102723 ~ 5110220 (+)
CI01000071_05142025_05161947 RNFT2 coding downstream 59872 5142025 ~ 5162294 (+)
CI01000071_05167170_05195192 FBXW8 coding downstream 84274 5166427 ~ 5195429 (+)
G283580 NA non-coding upstream 15161 5065791 ~ 5066007 (+)
G283557 NA non-coding upstream 16255 5064632 ~ 5064913 (+)
G283457 NA non-coding upstream 91464 4982595 ~ 4989704 (+)
G283422 NA non-coding upstream 110979 4969068 ~ 4970189 (+)
G283423 NA non-coding upstream 115727 4962938 ~ 4965441 (+)
G283570 NA non-coding downstream 31444 5113597 ~ 5115165 (+)
G283577 NA non-coding downstream 62609 5144762 ~ 5196867 (+)
G282080 NA other upstream 2024637 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 2252564 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 3703498 1373996 ~ 1377670 (+)
G280443 NA other upstream 4159072 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 4277851 791346 ~ 803317 (+)

Expression


Co-expression Network