G283440


Basic Information

Item Value
gene id G283440
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 4817956 ~ 4818229 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU321218
ATCTACTCTTTCGGCACATGCATGCATGATTTTCCCTGTTGCTCTCCTAAGGAAAAACATTTTGTCTTTTGGCCAAAGCATTTCCTCACATTATCTGCATCCATCAGAGGAACATTGCATTGCTCATAGGTTGCTCTTTTATCACTGACATACAGAAAGAGTATAAAGCAATAAAATTAAAAGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTAATTACTCACCCTCATGTCGTTCCACACCTGTAAGATCTTCATTCATCTTCGCAACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU321218 True 274 lncRNA 0.38 1 4817956 4818229

Neighbor

gene id symbol gene type direction distance location
CI01000071_04780189_04798898 AIFM3 coding upstream 19058 4780189 ~ 4798898 (+)
CI01000071_04751375_04752037 NA coding upstream 65514 4751169 ~ 4752442 (+)
CI01000071_04737911_04747060 LZTR1.L, LZTR1 coding upstream 70072 4737421 ~ 4748342 (+)
CI01000071_04706607_04712020 P2RX2 coding upstream 105733 4706607 ~ 4712223 (+)
CI01000071_04589416_04602399 YPEL2A, YPEL2B, YPEL1, YPEL2, YPELD, YPELC coding upstream 215461 4588324 ~ 4602495 (+)
CI01000071_04825708_04831021 NA coding downstream 7479 4825708 ~ 4831067 (+)
CI01000071_04834539_04839129 WSB2 coding downstream 16097 4834326 ~ 4839355 (+)
CI01000071_04851502_04865548 KSR2 coding downstream 33273 4851502 ~ 4865548 (+)
CI01000071_04903716_04959830 KSR2 coding downstream 85487 4903716 ~ 4959861 (+)
CI01000071_04982029_04982493 NA coding downstream 163127 4981356 ~ 4982540 (+)
G283401 NA non-coding upstream 99034 4715415 ~ 4718922 (+)
G282813 NA non-coding upstream 114048 4697875 ~ 4703908 (+)
G282838 NA non-coding upstream 121343 4692136 ~ 4696613 (+)
G283051 NA non-coding upstream 129669 4688082 ~ 4688287 (+)
G283442 NA non-coding downstream 4544 4822773 ~ 4823788 (+)
G283423 NA non-coding downstream 144709 4962938 ~ 4965441 (+)
G283422 NA non-coding downstream 150839 4969068 ~ 4970189 (+)
G283457 NA non-coding downstream 164366 4982595 ~ 4989704 (+)
G282080 NA other upstream 1761425 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 1989352 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 3440286 1373996 ~ 1377670 (+)
G280443 NA other upstream 3895860 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 4014639 791346 ~ 803317 (+)

Expression


Co-expression Network