G283557


Basic Information

Item Value
gene id G283557
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 5064632 ~ 5064913 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU321358
AACAGGAGACAGCACTGCACTGATTTGCTTTCTCATAGATTTAATTTAATTTAAGGATATCGATCCTGTCTGACTTGGGAAACCAGAGTGAATCGAATGTGATTTAGTTTGAACAAAACATTATTAAAATTAATTTGCAAACAATCACAAAGTCTCAAAACATACATAGAATGGTAGTGGGTAAAAAGGTAACAAAAGAAACTATTCTTCCATCTGTTTGTGAAGATGATGGAGATGAAGGTGGAAAAGAAGAGGATTTGGGAGGAATTGCAAGCAGGCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU321358 True 282 lncRNA 0.36 1 5064632 5064913

Neighbor

gene id symbol gene type direction distance location
CI01000071_05002535_05056745 NOS1 coding upstream 7224 5002189 ~ 5057408 (+)
CI01000071_04982029_04982493 NA coding upstream 82092 4981356 ~ 4982540 (+)
CI01000071_04903716_04959830 KSR2 coding upstream 104771 4903716 ~ 4959861 (+)
CI01000071_04851502_04865548 KSR2 coding upstream 199084 4851502 ~ 4865548 (+)
CI01000071_04834539_04839129 WSB2 coding upstream 225277 4834326 ~ 4839355 (+)
CI01000071_05081168_05081463 NA coding downstream 16255 5081168 ~ 5082153 (+)
CI01000071_05082669_05087793 NIPSNAP1 coding downstream 17387 5082300 ~ 5087817 (+)
CI01000071_05102723_05110135 GATSL3 coding downstream 37810 5102723 ~ 5110220 (+)
CI01000071_05142025_05161947 RNFT2 coding downstream 77112 5142025 ~ 5162294 (+)
CI01000071_05167170_05195192 FBXW8 coding downstream 101514 5166427 ~ 5195429 (+)
G283457 NA non-coding upstream 74928 4982595 ~ 4989704 (+)
G283422 NA non-coding upstream 94443 4969068 ~ 4970189 (+)
G283423 NA non-coding upstream 99191 4962938 ~ 4965441 (+)
G283442 NA non-coding upstream 240844 4822773 ~ 4823788 (+)
G283580 NA non-coding downstream 878 5065791 ~ 5066007 (+)
G283570 NA non-coding downstream 48684 5113597 ~ 5115165 (+)
G283577 NA non-coding downstream 79849 5144762 ~ 5196867 (+)
G282080 NA other upstream 2008101 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 2236028 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 3686962 1373996 ~ 1377670 (+)
G280443 NA other upstream 4142536 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 4261315 791346 ~ 803317 (+)

Expression


Co-expression Network