XLOC_010624 (creb5b)


Basic Information

Item Value
gene id XLOC_010624
gene name creb5b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 20529200 ~ 20707742 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020804
GTAATGCTTCTCTAAATAGATCGTATTGTAATCTTTCCTCAGTCCAACGTGGTTCCTTCAGAAAGTGTGCTGCATCTTCTCCAGACTTCTGCGGTGTATGAGGAGCCAGTGACAGTGATGAACTCGGAGCAGGAAAGGCCGTACGTGTGCAGCGCCCCGGGCTGTTCTCAGAGATTCCCAACAGAGGATCATCTAATGATTCATCGACACAAGCACGAGATGACCCTCAAATTCCCCTCCATCAAAAATGACAACATGCTGTCAGACCAGACGCCGACACCGACACGCTTCTTGAAGAACTGTGAGGAGGTGGGTCTCTTCAGTGAACTGGATTGCTCCATCGAGCAGGAGTTTTGCAAGGCTCAAGAGGAGGAAGACAGTAAACAGAATATCACTCTTCATGGGCAGGGAGGCCCTAACCAGCACCAGCAGGCCCACTCAAGAATGACCAACCATGACAGTATAGTGATCCAGCAGGCATTGCCCTCACCACAGTCAAGCTCAGTCATCACTCAAGCCCCTTCCACCAACAGACAGATTGGGCCAGTCCCGGGTTCTCTTTCCTCGTTGCTGCACCTGAGGAACAGACAGCGACAGCCACTGCCGGCCTCCATGCCTGGCACACTGCCTGACCCAACTATGCAAGGATCGTCTGCTGTCCTGATGCCTATGGAGAGGCAAATGTCTATGGGCTCCAACATGATGGGCATGCAAGGCCCCGCCCACAACAACTCATGCTCCTCCCCTCATGTTCCATCCATGCACTCAGAGGCAAAGCTGAGACTGAAAGCCGCTCTTGCCCACCATCCAGGGGGCATGGCGAATGGCAGCATGAACTCCATGGGTCATATGATGGAGATGATGCCCTCACGGCAGGATCAGACCGGGCACCACCACATGCACTCTCACCCTCACCAGCACATGCAGGGTCCCCCGCATGGATACCCACACCATGGCCACCACCACCCCAGCCATGCCCAGAGTGTCCATCACCACCCACAGAGCCACGGGCACCACAACTCCCACCCGGCCCACATGCACCCCGCACACGGACATCAGACTTCACCACATCAAGCCATGCACTCTGCTGCTTCACAGTTATCCCCAGCTGCTCAGCAAATGCAGCCCACGCAGACCCTTCAGTCCCCACTGCCCAGCGGAGGTCGTCGCAGACGGGTCGTGGACGAAGACCCAGATGAACGCAGACGGAAATTTCTTGAAAGGAATCGGGCCGCCGCCACACGCTGCAGACAAAAGCGGAAAGTCTGGGTGATGTCGCTAGAGAAGAAAGCGGAGGAACTCACCCAAACCAACATGCAGTTGCAGAACGAGGTCACCATGTTGAAGAACGAGGTGACACAACTGAAACAGCTTTTACTGACACACAAGGACTGTCCCATCACCACCATGCAGAAAGAGTCTCAAGGTTACCTCAGTCCAGAAAGCAGTCCGGCAGGAAGTCCCACTCCTGTAACCCAACAGCAAGTCATCCAGCACAACACCATCACCACCTCCAGCACGGCACCCAATCACTGCACAGATATCAACCCCATCCACTAGAGACTCCACCCTTGACGCTGGACATCCCGACTGCAAACTCTGGACAGACACACACCTCTGTGCCTCTGTGGCagcttttatttctgtttgtaaTTTGTAAACGTAAACTGattacaattttgtttatttctttgtgtTTTCTGTTACCATTCGAGTCCGCTTAAAAAAAGGGAGTCTGTATAATTCTTCAGGCACCATCCCGCTTGTCAAGAACATCAGGGACGGGTTGTTGTGGAAACACAGCCGCTACATCTGTTCCTGGACTACTACTGGACCAATGCCTTTACAAAATTCAGACAGCTGGACAGCCTTCGCCCTGAATTTTCCATTGCCAAAAGATGCTGTCCTTTCCTTTCTGTTTATTGTTAGAACAATTACTCTCACATTCCCCCGTTTTTATCTAATTGGAAAGGATAAATGAGGAAGGTCAGTCTCCATTAGGAACTCCTAATGAAAGTAATCTGAAGCAATACGAATGCCTGACATGATCAGCAATCTGATTGCCTTTACTTGCTCACTGGGGCCAGAATGTAGATCAGATTTAGTTCGCCCTTTTAGCTCCTGTCATTTCTGATATGGTTTCAAAAAGTTATCTTCTTAAAACAAAACGGCTTTGGCTTCTAAGCTGGTACAGATCACGTAAATGGAATGCATTTATCAAGCTGACACAGGCTCATGTGAGCGTATGCCCTGCTTGACATGTGCGGGATTTCGGAGTGTTTCCAGAGTTGTGAGATCACAGCTGCAATCGTGTTGCACCAGGAGGATGTCTCACTGGACGTTTATGTCTGAATCTTTCAGAAGtaccatcagctgttttcttttaAGCTGGTATGACTTCCAGTGCTCATCAGTTTTTCGGTGGCAGATCATTTCGTTATCTGTTTCAGATCTAAAACAGAGTGGACTAAGTTTTACGCACATCTTTTAATACATTCTTTTGTATGTTACATGCTCATACGTGGGCCTTCTAACCACGTCCAAAACACTCCTTAAGTGCATCTAATCTTGCAGCAGAAGAATGCCATGGAAAGCTTTTGGAAGGTTTTTGCTTTACCTAAGGCTATGGAAAACTTCCACAGGAGCCAAATGCATTGTTATTTGTTACTTAAAATTAGCTTTTGCTTTGGCTCAAAGTATTGTTTAGGTCTTCCTCAAGCAATATGACTGTgagataaaattaatttaacaggaTTTATTGTTATAGTGATGGTTCATGTGGTGCTTACATGACAAGGACCAATTTCAGTTATAAAGTATCCCTGACCAGAAAATTCTGCACTTGAataaacccagcaggcacacaaaatcacaagacgttaatattaggttagatttagatcatcatgtca

Function

symbol description
creb5b Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and cAMP response element binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in nucleus. Orthologous to human CREB5 (cAMP responsive element binding protein 5).

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091020-6 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and cAMP response element binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in nucleus. Orthologous to human CREB5 (cAMP responsive element binding protein 5).

Ensembl:

ensembl_id ENSDARG00000070536

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020804 True 2912 mRNA 0.48 11 20529200 20707742

Neighbor

gene id symbol gene type direction distance location
XLOC_010622 chn2 coding downstream 36401 20318400 ~ 20492799 (-)
XLOC_010623 CR354600.1 coding downstream 135391 20393693 ~ 20393809 (-)
XLOC_010621 NA coding downstream 216534 20309370 ~ 20312666 (-)
XLOC_010620 plekha8 coding downstream 234964 20265499 ~ 20294236 (-)
XLOC_010619 NA coding downstream 376475 20149577 ~ 20152725 (-)
XLOC_010625 tax1bp1b coding upstream 97580 20805322 ~ 20935507 (-)
XLOC_010627 NA coding upstream 215740 20923482 ~ 20927125 (-)
XLOC_010628 snx10b coding upstream 325891 21033633 ~ 21038015 (-)
XLOC_010629 cbx3b coding upstream 330778 21038520 ~ 21047872 (-)
XLOC_010630 NA coding upstream 371847 21079589 ~ 21083019 (-)
XLOC_010626 CR392024.2 misc upstream 187370 20895112 ~ 20895175 (-)
XLOC_010618 BX511151.1 non-coding downstream 485924 20041857 ~ 20043276 (-)
XLOC_010615 CU855948.1 non-coding downstream 694731 19828376 ~ 19834469 (-)
XLOC_010633 NA non-coding upstream 510600 21218342 ~ 21224878 (-)
XLOC_010635 BX469919.1 non-coding upstream 743413 21451155 ~ 21451284 (-)
XLOC_010643 FP015862.3 non-coding upstream 1092643 21800385 ~ 21803111 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000016_08111153_08185623 CREB5 coding CI01000016 null 8111153 ~ 8185623 (-)