CI01000072_04514012_04539785


Basic Information

Item Value
gene id CI01000072_04514012_04539785
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 4512778 ~ 4539876 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000072_04514012_04539785.mRNA
ACTATTTCTTTATTAATTCTTTATTAATAAATAAGCTTCAGGAACTTTTTAAAATAAATTTGCATCAAGGTTTTATAGTTTGTATAATACAATGAATATAATCATTATCATAATTGAGCCAGTATCTGTGAAGAGCATATTTTGGAATCCAAAATTTGGCAAATGTGATCACTCCGGGGAAATAGAGCAGAGAGGAAACTACGTGCCTTCACCGAGCAAGGGCTGTCTGGTGTCATGGCAACCAGTGCGGATTACCCCACCCTCTCCAATCAGCCTCGAGAGGGAGGAGGAGGAGAAAAGGATGGAGAGAGAGTCAGGAAGGGCTGAGGACAGGCGGATACTAGGAGTCCAGCTTTCAACCAATAGTGCACAGGCCAGGAATGGGTGGAATGTGTTTGCACTGGCAAAGGGGAATAACAGTAAAGATAATGGTAACAATAAGCATGTGCGTGTTTCTGGTGGGTACTACCGTCTGCTGCAGGCCTGCTTAAGGGAAGCTGGCATACTAGAGAGTATTTACCACACTTTTAAGGCTGTAGTTTTCTTTAGTGTGTTTGCAACAGAGGGGTTAATTAAAATTTGCACCCTCCAGTTTTGTAGCACGAAGCACAAAGTCATCATTCAAATAACCAAGCAACTGAACACAAGTTCAGAAAACATCACTGTCCCAAAAAGACAGAAATTTGACATCAAACAGACTCAGGTCTACACCAAACACTGTAGAGAACTACACTTTGCAGAGAAGAGCATACTGTGTAGCCACATCCAGCTCAGCCTGACCTTCGCCGTCCTTGGCGTTCCAACCGCGAATAAGCGAGAACAAGCAGACTTGGAAGACGAGAGCTGGTTGAATAAAGCCGTGAGGAAAGAAAGAGAGGATTTCATTGTGTTTGTCTTAAACATATCCTCATCGGTCAGCGATCTGCGGCTGAAACGTAAAAACTCCAAAAATGATAAGCTCAAACGACGTGAAACTTTAGAAGAGGAGCGGCGGGAGCAGCGGAGGCGTGTGGGGTCCGGGGCAGGTTGCAGCGGCCCCATACAGGCCCCATACGGCTTGGTCTCAGAGCAGAGAGGCACAGAGGTGGCTGTGCAGGAACAATGGCTCTCTTTGTAAGCCGGCCTGGCTGTGCAAAGCCACAAGATGTCTTCCCCATATGAAGCTGATCATTGTTCCCTCTCCTGCTTTCCCTTTTCTTCCTTTCACTGGTTTAAGCAGCCTGTCCTGCTTGCTGTCAGCCTGACATGTCTCTCTCCCCAGGCACCCCAACAACCATTCAACACAAATATAAAGAGAAGTCACTAACACTTCCATCCTGCGATCACACTTGTGTGTTGCTCCCTGTGTTTGTTTGTTTGTTTGTTCACTTTGACTGCCATATGCTCAACCATGAGAAGAAGAGACACACTTTGCCTGCTGTTCCCTAGTGTTGGCATGTTTAGTAGAAACAACAACAAACACAACTTATGTGCTTATCTCATCTGTACTTTTTTCTTTTCTTTTTTTGGCGGAGGGAGTTTGGCGCCATGTTCCTGCAATGCATCTTTTAACACCTGACAGACAATGAATGTGAGGTCATTCGCAGGGTGGTGCGGTATTAGGTCTCGGATTCCTCTCGACATGCATCATCAGGTATGCAGCATTTTTTGGACGATCGTTGTATCCGTTTCATGGAAGGAGTCGTTGGGCGTGAGACAGAAGAGCGTACGGTTCGGTTTCAGCCTGCTTTCTAAACCTGGCCATATGCCCCTTGTGCCTATTACCTTTCTCCTCCCTGATCTGAGCACTGAACAGATAATACTTATCCATATGGCAGAATATTACTTACAATGTTGCTTACAGGGGAATCTGAAGCGCAGGCGGCCTGTTGGTTCAGACCGTTGGTCTGATCACAGTGGTCAACTCATTCAGAGGTCATTAAACTGGGGGCTGGTAATCCCAGGGTACCACAAGGCGGTGCTAGGGGGTCTGTGAAAATAAAATTTAATGTAAAAAATGTATTTTTAGGGCTGTCATAGTTAAAATTGGCACTTAAGATAATAATAAAATATGTTTAACTAAAATGTTTTTTTTTTTTACATCACCACATTTTATAATAATATCATTTTATTCTGATTCCGAATGATTGGTCCAGAATTATTAAATTAAATGTAAAGTAAATGTATACACACACACACACACACAAATATTAATGAACAGCACACATTTTTTTGGCAATTCGGTAACCAAATTCGGTAATATTGTTATTTCATCCTGCTTTCTAAACGCTGGTCAGAAATCATGAGATTAATTGTGATTATATTTTTTTTATTCTATTGAGAGCAGTTTTTAACAGTGAGAAGAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000072_04514012_04539785.mRNA False 2351 mRNA 0.43 8 4512778 4539876

Neighbor

gene id symbol gene type direction distance location
CI01000072_04315603_04316880 NA coding downstream 195898 4314911 ~ 4316880 (-)
CI01000072_04284927_04303593 PPP2R1A, PPP2R1B, PDGFB, PPP2R1B.S coding downstream 209185 4284426 ~ 4303593 (-)
CI01000072_04207000_04210775 NA coding downstream 301700 4206961 ~ 4211078 (-)
CI01000072_04197826_04201434 NA coding downstream 311344 4197826 ~ 4201434 (-)
CI01000072_04191370_04195085 NA coding downstream 317693 4191370 ~ 4195085 (-)
CI01000072_04577347_04600719 UBASH3BB coding upstream 37173 4577049 ~ 4600719 (-)
CI01000072_04602970_04610481 GKUP coding upstream 62973 4602849 ~ 4610481 (-)
CI01000072_04613981_04618187 USF1 coding upstream 73564 4613440 ~ 4618187 (-)
CI01000072_04796909_04805902 NA coding upstream 256904 4796780 ~ 4805902 (-)
CI01000072_04810045_04816219 RILP coding upstream 270020 4809896 ~ 4816492 (-)
G286994 NA non-coding downstream 2145 4503433 ~ 4510633 (-)
G287072 NA non-coding downstream 81473 4430911 ~ 4431305 (-)
G287071 NA non-coding downstream 81920 4430643 ~ 4430858 (-)
G287024 NA non-coding downstream 90109 4422374 ~ 4422669 (-)
G287060 NA non-coding downstream 90929 4421336 ~ 4421849 (-)
G287027 NA non-coding upstream 82031 4621907 ~ 4685983 (-)
G286959 NA non-coding upstream 83735 4623611 ~ 4626334 (-)
G286964 NA non-coding upstream 104084 4643960 ~ 4748612 (-)
G287026 NA non-coding upstream 110897 4650773 ~ 4672927 (-)
G286983 NA non-coding upstream 134317 4674193 ~ 4723369 (-)
G287021 NA other downstream 118555 4386145 ~ 4394223 (-)
CI01000072_03972493_03983836 SPA17 other downstream 536711 3972401 ~ 3983836 (-)
G286005 NA other downstream 1513283 2993769 ~ 2999495 (-)
G285752 NA other downstream 2342120 2168048 ~ 2170658 (-)
G285766 NA other downstream 2504469 2005551 ~ 2008309 (-)
G287264 NA other upstream 840844 5380720 ~ 5382001 (-)

Expression


Co-expression Network