CI01000072_04602970_04610481 (GKUP)


Basic Information

Item Value
gene id CI01000072_04602970_04610481
gene name GKUP
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 4602849 ~ 4610481 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000072_04602970_04610481.mRNA
TCGCCAGCTCTTCAGTGAAGTTTATCTAGTCACGAATGCTGATAAATACAAGCACTATGAACGATGGGCAACAGCCAATGACTTTCCAGTGGAGAATGTTGTGAATGATGGCAGCACTACTTTGGATGACAGACTTGGGGCTGTTGCAGACCTTGAATTGGCCATCCGAAGCCGACAGCTACAAGATGACATTATGGTGATCGCAGGAGACATGCTTTGTGCTGATCAAAACTTTGATATTGCACAAGTCATTCGCTTTTTCAGATCTAAGCCTGGAGAACTTGCTATATATTATGAGCTGGAGTCAGGAGAGAAGAGCTACTCCAGAGGAATTGTTGAAGTTTGTCCGAACACCCATCGCATTTTAAGCATTGAGCATCTGTTATTACAGGGTCTGTCTGATTACACGAAATGGCTCGCTCACTATTCTTCAAAACAGCAGCTGTCCCCATCTAAACCCATCACATGCCGCTCATATGCCAGGGTTGGACTCATGGGGAACCCCTCTGATGGATTCAATGGGAAAACCATTGCTATGACCATTGCTAACTTCTGGGCTGAGGTCACACTGATGGAGAGCCAGGCTCTGGTCCTTCTACCTCATCCTCTGAATGACCCTACGGAGTTCGGAAGCTTGCAGGATCTCTTTCGGATCAGCCGGAAAGAAGGCATTGCTCTGTCCAAGCAGAATTTTACTCTCAAGTATGACACAAACATTCCTCGGCAAGTGGATCTTCCTAAACCAGTCAGAGCCAACTTCATCCTCAACGTAGAGACGGATGAGCTGTTCATCACAGCTGGTCTACAGGATCGAGTTGTGCAGGTCTATGAAGGCTTGGTTTACATGGACTTCAACAAACAGCTTATGGACGAGCGGGGTTATGGAGAATACATTCCCTTGGACATGAACGATCTTCCCTTGTTCTGGCTGGCGTACTTGGGCGATCCAAGTGATTCTGGACGGATTCACAGTAATGTTAGACAGCGCTGGTTGAACGGTGACTCTGCTGTGGTTGAAGCTATGAAATCGTTTGCTGAACTCACAGACCAAGCCCGAGCTGCCTTCCAGTGTAAGGACTGGCCCAGACTCGCACAGCTCATGGATGAAAACTTTGAGCTACGGCGTTCGGTGTATACTGAAGACTGCTTGGGCCCTGGAAATCTGAAAATGGTACAGCTTGCGAGACAGTTTGAATCTGCAGTCAAATTGCCCGGCAGTGGTGGTGCTGTGGTGGGCTTGTGTATGAACCAAGAGCGACTGGTATGGAAGATCTTTTGACTTTTATATAATGCTTGTAATGCTTGTAATTTAATTTATGACATGTGTGAATTACCATAATTAGGAGGCAGCAACTAACTTAGGATTCTACTCAGAGCTGTTAACCATTATGTATAATAAA

Function

symbol description
gkup Enables glucuronokinase activity. Predicted to act upstream of or within biosynthetic process.

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K16190 GLCAK; glucuronokinase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000072_04602970_04610481.mRNA True 1400 mRNA 0.46 15 4602849 4610481

Neighbor

gene id symbol gene type direction distance location
CI01000072_04577347_04600719 UBASH3BB coding downstream 2130 4577049 ~ 4600719 (-)
CI01000072_04514012_04539785 NA coding downstream 62973 4512778 ~ 4539876 (-)
CI01000072_04315603_04316880 NA coding downstream 285969 4314911 ~ 4316880 (-)
CI01000072_04284927_04303593 PPP2R1A, PPP2R1B, PDGFB, PPP2R1B.S coding downstream 299256 4284426 ~ 4303593 (-)
CI01000072_04207000_04210775 NA coding downstream 391771 4206961 ~ 4211078 (-)
CI01000072_04613981_04618187 USF1 coding upstream 2959 4613440 ~ 4618187 (-)
CI01000072_04796909_04805902 NA coding upstream 186299 4796780 ~ 4805902 (-)
CI01000072_04810045_04816219 RILP coding upstream 199415 4809896 ~ 4816492 (-)
CI01000072_04818513_04830986 PRPF8, PRPF8.S coding upstream 207664 4818145 ~ 4831797 (-)
CI01000072_04932845_04949502 GIT1 coding upstream 322219 4932700 ~ 4949502 (-)
G286994 NA non-coding downstream 92216 4503433 ~ 4510633 (-)
G287072 NA non-coding downstream 171544 4430911 ~ 4431305 (-)
G287071 NA non-coding downstream 171991 4430643 ~ 4430858 (-)
G287024 NA non-coding downstream 180180 4422374 ~ 4422669 (-)
G287027 NA non-coding upstream 11426 4621907 ~ 4685983 (-)
G286959 NA non-coding upstream 13130 4623611 ~ 4626334 (-)
G286964 NA non-coding upstream 33479 4643960 ~ 4748612 (-)
G287026 NA non-coding upstream 40292 4650773 ~ 4672927 (-)
G286983 NA non-coding upstream 63712 4674193 ~ 4723369 (-)
G287021 NA other downstream 208626 4386145 ~ 4394223 (-)
CI01000072_03972493_03983836 SPA17 other downstream 626782 3972401 ~ 3983836 (-)
G286005 NA other downstream 1603354 2993769 ~ 2999495 (-)
G285752 NA other downstream 2432191 2168048 ~ 2170658 (-)
G285766 NA other downstream 2594540 2005551 ~ 2008309 (-)
G287264 NA other upstream 770239 5380720 ~ 5382001 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location