CI01000072_05053749_05071797 (BLMH)


Basic Information

Item Value
gene id CI01000072_05053749_05071797
gene name BLMH
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 5053644 ~ 5071797 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000072_05053749_05071797.mRNA
GACTGAGTCAGGAGAAAGCATCAGCTTTTGTCAAGCGCTTCCGCTCGGAGCCTCGATATCTGCTCGCCCAGAACGTCTCAACTTGCATTGATCCATTAGAGGTGTGTCTGCATCGGCAGACGGTCCAGGACACAGTACACATCTTCCAGCACAGCATTCCCACAGAGGGCAAACCTGTTACCAACCAGAAAAATTCAGGGAGATGTTGGATCTTCTCATGTCTCAATGTAATACGTCTTCCATTTATGAAGAAGTTTAACATTGAAGAATTTGAATTCAGTCAGTCTTATCTTTTTTTCTGGGATAAGGTGGAGAGGTGCTATTATTTTCTGCATGCCTGTGTGGAGACAGCCCAGCGGAAGGAGTCAGTAGATGGCAGACTGGTTCAGTTCCTGCTATCAAATCCTACCAATGATGGTGGACAGTGGGATATGCTAGTTAACCTTATTGAAAAATACGGTGTCGTCCCTAAGAAGTGCTTCCCCGAGTCTCACAGCTCAGAGGCTTCCCGAAGAATGAACGATATCCTCAATCACAAGTTGAGAGAATATTGTCTAAGGCTGAGGAACATGGTGGCCAGTGAAGCCACTAAAACTGAGCTGTCTGACACTATAGACACCATGATTGAGGAGGACAAACACATGCCCGAGTATGATCTACTTCCCTGTAAATCTGGTTGTGAAACACTCTCCTCTCACCCGCTTGTGTTTCGAGTGGCCAGTGTGTGTCTGGGCAGTCCTCCAGACACCATCTGTTGGGAATACCGGGACAAGGACAAGAACTTTCACCGCATGGGCCCATTAACTCCTTTGGAGTTCTACACACAGCACGTCAAACCCCTCTATAACCTCCAGGACAAGGTCTGCCTCGTTAACGACCCTCGGCCCCAAAACCCCTATGGGAAGCTGTACAGTGTGGAGTTTCTGGGCAACATGGTGGGCGGCCGCAAAACACTTTACAACAACCAGCCCATCGAGCTGCTCAAAAAAGCTGCTGCAGATTCCATCAAGAATGGAGAGGCGGTGTGGTTTGGCTGTGACGTAGGCAAACATTTCCATAGCAAACTGGGCATCAATGACATGAATGTGTTTAACCATGACCTGGTGTTTGGCATCTCAGTGAAAAACTTATCTAAGGCGGAAAGGTTGATCTATGGAGACTCCATGATGACCCACGCCATGATCCTGACTGCCGTTACTGACAAGAATGGAAAGGAGGAATGCTATGAGAAGTGGCGTGTGGAGAACTCGTGGGGAGACGATCGTGGGAATAAAGGATATCTGATCATGACAGACGAGTGGTTCTCCGAGTATGTATACGAGGTGGTGGTGGATAAGAGTTACATCCCTCCTGAAGTGCTGGACGTCATGCAGCAAGACCCCGTCGTCCTCCCGGCCTGGGACCCCATGGGAGCCCTGGCTTAACCACAGGAGCCAAAGGCACCAGTCTCCTTGACTCTGCCGCCAACTGGTTTTTAACCTTCCCATCATCTCTCACAAAAAGCCTGGTCTAGATAAAAAAAAAATAAA

Function

symbol description
blmh Predicted to enable cysteine-type peptidase activity. Predicted to be involved in homocysteine catabolic process and response to toxic substance. Predicted to act upstream of or within proteolysis. Predicted to be active in cytoplasm. Orthologous to human BLMH (bleomycin hydrolase).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K01372 BLMH, pepC; bleomycin hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000072_05053749_05071797.mRNA True 1529 mRNA 0.49 12 5053644 5071797

Neighbor

gene id symbol gene type direction distance location
CI01000072_05039232_05046122 SLC6A4A, SLC6A4 coding downstream 7170 5039086 ~ 5046474 (-)
CI01000072_04992647_05006768 SSH2A coding downstream 46876 4992218 ~ 5006768 (-)
CI01000072_04932845_04949502 GIT1 coding downstream 104142 4932700 ~ 4949502 (-)
CI01000072_04818513_04830986 PRPF8, PRPF8.S coding downstream 221847 4818145 ~ 4831797 (-)
CI01000072_04810045_04816219 RILP coding downstream 237152 4809896 ~ 4816492 (-)
CI01000072_05099789_05108316 NA coding upstream 27624 5099421 ~ 5109781 (-)
CI01000072_05158807_05160357 NA coding upstream 86480 5158277 ~ 5161493 (-)
CI01000072_05172707_05173819 GPR4 coding upstream 100882 5172679 ~ 5174665 (-)
CI01000072_05208841_05218652 EML2 coding upstream 137044 5208841 ~ 5218652 (-)
CI01000072_05268621_05275350 NA coding upstream 196756 5268553 ~ 5275643 (-)
G287011 NA non-coding downstream 26552 5026121 ~ 5027092 (-)
G287154 NA non-coding downstream 30051 5023345 ~ 5023593 (-)
G286962 NA non-coding downstream 172006 4878140 ~ 4881638 (-)
G287129 NA non-coding downstream 212091 4840887 ~ 4841553 (-)
G286997 NA non-coding downstream 257199 4796091 ~ 4796445 (-)
G287161 NA non-coding upstream 59345 5131142 ~ 5140674 (-)
G287206 NA non-coding upstream 78927 5150724 ~ 5151489 (-)
G287210 NA non-coding upstream 90062 5161859 ~ 5162242 (-)
G287213 NA non-coding upstream 95686 5167483 ~ 5167727 (-)
G287230 NA non-coding upstream 196377 5268174 ~ 5268465 (-)
G287021 NA other downstream 659421 4386145 ~ 4394223 (-)
CI01000072_03972493_03983836 SPA17 other downstream 1077577 3972401 ~ 3983836 (-)
G286005 NA other downstream 2054149 2993769 ~ 2999495 (-)
G285752 NA other downstream 2882986 2168048 ~ 2170658 (-)
G285766 NA other downstream 3045335 2005551 ~ 2008309 (-)
G287264 NA other upstream 308923 5380720 ~ 5382001 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G3368 NA non-coding NC_053112.1 CM020909.1 9751329 ~ 9755028 (-)