Gene
RNA
| Item | Value |
|---|---|
| gene id | G286140 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000072 |
| NCBI id | null |
| chromosome length | 5473029 |
| location | 2907354 ~ 2907794 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU324282 | False | 350 | lncRNA | 0.40 | 1 | 2907354 | 2907703 |
| TU324280 | False | 373 | lncRNA | 0.44 | 1 | 2907422 | 2907794 |
| TU324283 | True | 282 | lncRNA | 0.44 | 1 | 2907422 | 2907703 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000072_02653471_02758823 | SEZ6, SEZ6B | coding | downstream | 148531 | 2653471 ~ 2758823 (-) |
| CI01000072_02633510_02645090 | NA | coding | downstream | 261962 | 2632837 ~ 2645392 (-) |
| CI01000072_02628853_02630214 | DHRS13B, DHRS13 | coding | downstream | 277140 | 2628083 ~ 2630214 (-) |
| CI01000072_02617680_02621357 | NA | coding | downstream | 285820 | 2617309 ~ 2621534 (-) |
| CI01000072_02572648_02594029 | SMTNL, SMTNL2 | coding | downstream | 313325 | 2572648 ~ 2594029 (-) |
| CI01000072_02922504_03031111 | MYO18AB, MYO18A, MYO18A.L | coding | upstream | 14710 | 2922504 ~ 3031111 (-) |
| CI01000072_03049529_03055114 | NA | coding | upstream | 140208 | 3048002 ~ 3055582 (-) |
| CI01000072_03114079_03114839 | IFT20, IFT20.S, IFT20.L | coding | upstream | 205930 | 3113724 ~ 3114839 (-) |
| CI01000072_03144427_03154133 | SAE1 | coding | upstream | 236524 | 3144318 ~ 3155095 (-) |
| CI01000072_03189624_03195527 | KLC3 | coding | upstream | 281757 | 3189551 ~ 3195527 (-) |
| G286139 | NA | non-coding | downstream | 902 | 2906213 ~ 2906452 (-) |
| G286135 | NA | non-coding | downstream | 5363 | 2901751 ~ 2901991 (-) |
| G286134 | NA | non-coding | downstream | 6167 | 2900975 ~ 2901187 (-) |
| G286128 | NA | non-coding | downstream | 31329 | 2875681 ~ 2876025 (-) |
| G286127 | NA | non-coding | downstream | 31694 | 2875363 ~ 2875660 (-) |
| G285998 | NA | non-coding | upstream | 91944 | 2999738 ~ 3009578 (-) |
| G286142 | NA | non-coding | upstream | 126493 | 3034287 ~ 3034608 (-) |
| G286144 | NA | non-coding | upstream | 148197 | 3055991 ~ 3072797 (-) |
| G286166 | NA | non-coding | upstream | 195936 | 3103730 ~ 3104264 (-) |
| G286172 | NA | non-coding | upstream | 211967 | 3119761 ~ 3120001 (-) |
| G285752 | NA | other | downstream | 736696 | 2168048 ~ 2170658 (-) |
| G285766 | NA | other | downstream | 899045 | 2005551 ~ 2008309 (-) |
| CI01000072_01596829_01610605 | NA | other | downstream | 1279459 | 1594111 ~ 1627895 (-) |
| G285534 | NA | other | downstream | 1552422 | 1335507 ~ 1354932 (-) |
| CI01000072_00281180_00284855 | NA | other | downstream | 2623075 | 280703 ~ 285182 (-) |
| G286005 | NA | other | upstream | 85975 | 2993769 ~ 2999495 (-) |
| CI01000072_03972493_03983836 | SPA17 | other | upstream | 1062476 | 3972401 ~ 3983836 (-) |
| G287021 | NA | other | upstream | 1478351 | 4386145 ~ 4394223 (-) |
| G287264 | NA | other | upstream | 2472926 | 5380720 ~ 5382001 (-) |
