G286289


Basic Information

Item Value
gene id G286289
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 3390707 ~ 3391150 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU324481
AAAAAGTTTAATCTGGATCAGAATGATCTGGATTTGGAAATCCCATGTTTTGCTATCCAGGATCAGGTAATCCATCTTTTTTTTTTGTGCTGGTTTTTCAAAGTAAAATTGGATTGGATCACCCTGATCCAGATACACACTTTTTCAGATGACCAAATCTGGATTACTAGTGCTCTACAGAGCCCCTAAAGGGACATGGTGATAGAAGGAATATGGGTAAAAAAAAACATTTCAATGCTTTTGTGTTCTCTCAGAAAAGTCCCGCATAGTGTTCACCCCAGAAACTTTGTGTTCGCTCGCAAAGAACTTTTGACTGGTTCATCTCTTATGATTGTGCCAATATAGTTTACAAACAGTGATTTAAAAAAAAACAAAAAAACAAAAACAAAAAAACACTTTAAATTAAATATAGTCTTTTTGTTTGGTATTTACAGTACATTATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU324481 True 444 lncRNA 0.33 1 3390707 3391150

Neighbor

gene id symbol gene type direction distance location
CI01000072_03379532_03381460 NA coding downstream 8165 3379323 ~ 3382542 (-)
CI01000072_03330998_03335358 NA coding downstream 55349 3330817 ~ 3335358 (-)
CI01000072_03270542_03289988 NA coding downstream 100517 3270479 ~ 3290190 (-)
CI01000072_03210624_03244667 MARK4, MARK4A coding downstream 146040 3210219 ~ 3244667 (-)
CI01000072_03189624_03195527 KLC3 coding downstream 195180 3189551 ~ 3195527 (-)
CI01000072_03396929_03398233 RNF26 coding upstream 5497 3396647 ~ 3399019 (-)
CI01000072_03455112_03462887 CBL coding upstream 63521 3454671 ~ 3462887 (-)
CI01000072_03497623_03625293 GRIK4 coding upstream 106473 3497623 ~ 3625293 (-)
CI01000072_03788767_03792874 NA coding upstream 397020 3788170 ~ 3793728 (-)
CI01000072_03844170_03870555 ARHGEF12A coding upstream 452342 3843492 ~ 3870555 (-)
G286285 NA non-coding downstream 6672 3383823 ~ 3384035 (-)
G286284 NA non-coding downstream 21499 3368368 ~ 3369208 (-)
G286281 NA non-coding downstream 32921 3357489 ~ 3357786 (-)
G286280 NA non-coding downstream 33263 3356427 ~ 3357444 (-)
G286278 NA non-coding downstream 35125 3355358 ~ 3355582 (-)
G286290 NA non-coding upstream 13 3391163 ~ 3391378 (-)
G286249 NA non-coding upstream 2613 3393763 ~ 3473051 (-)
G286219 NA non-coding upstream 19512 3410662 ~ 3436199 (-)
G286236 NA non-coding upstream 109951 3501101 ~ 3502215 (-)
G286256 NA non-coding upstream 450520 3841670 ~ 3842062 (-)
G286005 NA other downstream 391212 2993769 ~ 2999495 (-)
G285752 NA other downstream 1220049 2168048 ~ 2170658 (-)
G285766 NA other downstream 1382398 2005551 ~ 2008309 (-)
CI01000072_01596829_01610605 NA other downstream 1762812 1594111 ~ 1627895 (-)
G285534 NA other downstream 2035775 1335507 ~ 1354932 (-)
CI01000072_03972493_03983836 SPA17 other upstream 579120 3972401 ~ 3983836 (-)
G287021 NA other upstream 994995 4386145 ~ 4394223 (-)
G287264 NA other upstream 1989570 5380720 ~ 5382001 (-)

Expression


Co-expression Network