Gene
RNA
| Item | Value |
|---|---|
| gene id | G286945 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000072 |
| NCBI id | null |
| chromosome length | 5473029 |
| location | 4309678 ~ 4309912 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU325283 | True | 235 | lncRNA | 0.35 | 1 | 4309678 | 4309912 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000072_04284927_04303593 | PPP2R1A, PPP2R1B, PDGFB, PPP2R1B.S | coding | downstream | 6085 | 4284426 ~ 4303593 (-) |
| CI01000072_04207000_04210775 | NA | coding | downstream | 98600 | 4206961 ~ 4211078 (-) |
| CI01000072_04197826_04201434 | NA | coding | downstream | 108244 | 4197826 ~ 4201434 (-) |
| CI01000072_04191370_04195085 | NA | coding | downstream | 114593 | 4191370 ~ 4195085 (-) |
| CI01000072_04156907_04167270 | NA | coding | downstream | 142408 | 4156907 ~ 4167270 (-) |
| CI01000072_04315603_04316880 | NA | coding | upstream | 4999 | 4314911 ~ 4316880 (-) |
| CI01000072_04514012_04539785 | NA | coding | upstream | 202866 | 4512778 ~ 4539876 (-) |
| CI01000072_04577347_04600719 | UBASH3BB | coding | upstream | 267137 | 4577049 ~ 4600719 (-) |
| CI01000072_04602970_04610481 | GKUP | coding | upstream | 292937 | 4602849 ~ 4610481 (-) |
| CI01000072_04613981_04618187 | USF1 | coding | upstream | 303528 | 4613440 ~ 4618187 (-) |
| G286940 | NA | non-coding | downstream | 4160 | 4305299 ~ 4305518 (-) |
| G286937 | NA | non-coding | downstream | 32416 | 4277003 ~ 4277262 (-) |
| G286936 | NA | non-coding | downstream | 32809 | 4276560 ~ 4276869 (-) |
| G286883 | NA | non-coding | downstream | 39664 | 4269022 ~ 4270014 (-) |
| G286880 | NA | non-coding | downstream | 216353 | 4093110 ~ 4093325 (-) |
| G286948 | NA | non-coding | upstream | 9644 | 4319556 ~ 4319768 (-) |
| G286953 | NA | non-coding | upstream | 21972 | 4331884 ~ 4338077 (-) |
| G287023 | NA | non-coding | upstream | 103625 | 4413537 ~ 4414351 (-) |
| G287059 | NA | non-coding | upstream | 110285 | 4420197 ~ 4420415 (-) |
| G287060 | NA | non-coding | upstream | 111424 | 4421336 ~ 4421849 (-) |
| CI01000072_03972493_03983836 | SPA17 | other | downstream | 333611 | 3972401 ~ 3983836 (-) |
| G286005 | NA | other | downstream | 1310183 | 2993769 ~ 2999495 (-) |
| G285752 | NA | other | downstream | 2139020 | 2168048 ~ 2170658 (-) |
| G285766 | NA | other | downstream | 2301369 | 2005551 ~ 2008309 (-) |
| CI01000072_01596829_01610605 | NA | other | downstream | 2681783 | 1594111 ~ 1627895 (-) |
| G287021 | NA | other | upstream | 76233 | 4386145 ~ 4394223 (-) |
| G287264 | NA | other | upstream | 1070808 | 5380720 ~ 5382001 (-) |
