Gene
RNA
| Item | Value |
|---|---|
| gene id | G287059 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000072 |
| NCBI id | null |
| chromosome length | 5473029 |
| location | 4420197 ~ 4420415 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU325419 | True | 219 | lncRNA | 0.35 | 1 | 4420197 | 4420415 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000072_04315603_04316880 | NA | coding | downstream | 103317 | 4314911 ~ 4316880 (-) |
| CI01000072_04284927_04303593 | PPP2R1A, PPP2R1B, PDGFB, PPP2R1B.S | coding | downstream | 116604 | 4284426 ~ 4303593 (-) |
| CI01000072_04207000_04210775 | NA | coding | downstream | 209119 | 4206961 ~ 4211078 (-) |
| CI01000072_04197826_04201434 | NA | coding | downstream | 218763 | 4197826 ~ 4201434 (-) |
| CI01000072_04191370_04195085 | NA | coding | downstream | 225112 | 4191370 ~ 4195085 (-) |
| CI01000072_04514012_04539785 | NA | coding | upstream | 92363 | 4512778 ~ 4539876 (-) |
| CI01000072_04577347_04600719 | UBASH3BB | coding | upstream | 156634 | 4577049 ~ 4600719 (-) |
| CI01000072_04602970_04610481 | GKUP | coding | upstream | 182434 | 4602849 ~ 4610481 (-) |
| CI01000072_04613981_04618187 | USF1 | coding | upstream | 193025 | 4613440 ~ 4618187 (-) |
| CI01000072_04796909_04805902 | NA | coding | upstream | 376365 | 4796780 ~ 4805902 (-) |
| G287023 | NA | non-coding | downstream | 5846 | 4413537 ~ 4414351 (-) |
| G286953 | NA | non-coding | downstream | 82120 | 4331884 ~ 4338077 (-) |
| G286948 | NA | non-coding | downstream | 100429 | 4319556 ~ 4319768 (-) |
| G286945 | NA | non-coding | downstream | 110285 | 4309678 ~ 4309912 (-) |
| G286940 | NA | non-coding | downstream | 114679 | 4305299 ~ 4305518 (-) |
| G287060 | NA | non-coding | upstream | 921 | 4421336 ~ 4421849 (-) |
| G287024 | NA | non-coding | upstream | 1959 | 4422374 ~ 4422669 (-) |
| G287071 | NA | non-coding | upstream | 10228 | 4430643 ~ 4430858 (-) |
| G287072 | NA | non-coding | upstream | 10496 | 4430911 ~ 4431305 (-) |
| G286994 | NA | non-coding | upstream | 83018 | 4503433 ~ 4510633 (-) |
| G287021 | NA | other | downstream | 25974 | 4386145 ~ 4394223 (-) |
| CI01000072_03972493_03983836 | SPA17 | other | downstream | 444130 | 3972401 ~ 3983836 (-) |
| G286005 | NA | other | downstream | 1420702 | 2993769 ~ 2999495 (-) |
| G285752 | NA | other | downstream | 2249539 | 2168048 ~ 2170658 (-) |
| G285766 | NA | other | downstream | 2411888 | 2005551 ~ 2008309 (-) |
| G287264 | NA | other | upstream | 960305 | 5380720 ~ 5382001 (-) |
