Gene
RNA
| Item | Value |
|---|---|
| gene id | G287129 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000072 |
| NCBI id | null |
| chromosome length | 5473029 |
| location | 4840887 ~ 4841553 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU325494 | True | 266 | lncRNA | 0.35 | 2 | 4840887 | 4841553 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000072_04818513_04830986 | PRPF8, PRPF8.S | coding | downstream | 9090 | 4818145 ~ 4831797 (-) |
| CI01000072_04810045_04816219 | RILP | coding | downstream | 24395 | 4809896 ~ 4816492 (-) |
| CI01000072_04796909_04805902 | NA | coding | downstream | 34985 | 4796780 ~ 4805902 (-) |
| CI01000072_04613981_04618187 | USF1 | coding | downstream | 222700 | 4613440 ~ 4618187 (-) |
| CI01000072_04602970_04610481 | GKUP | coding | downstream | 230406 | 4602849 ~ 4610481 (-) |
| CI01000072_04932845_04949502 | GIT1 | coding | upstream | 91147 | 4932700 ~ 4949502 (-) |
| CI01000072_04992647_05006768 | SSH2A | coding | upstream | 150665 | 4992218 ~ 5006768 (-) |
| CI01000072_05039232_05046122 | SLC6A4A, SLC6A4 | coding | upstream | 197533 | 5039086 ~ 5046474 (-) |
| CI01000072_05053749_05071797 | BLMH | coding | upstream | 212091 | 5053644 ~ 5071797 (-) |
| CI01000072_05099789_05108316 | NA | coding | upstream | 257868 | 5099421 ~ 5109781 (-) |
| G286997 | NA | non-coding | downstream | 44442 | 4796091 ~ 4796445 (-) |
| G287111 | NA | non-coding | downstream | 69451 | 4771077 ~ 4771436 (-) |
| G287109 | NA | non-coding | downstream | 72049 | 4768631 ~ 4768838 (-) |
| G287108 | NA | non-coding | downstream | 73037 | 4767182 ~ 4767850 (-) |
| G286974 | NA | non-coding | downstream | 79540 | 4760801 ~ 4761347 (-) |
| G286962 | NA | non-coding | upstream | 36587 | 4878140 ~ 4881638 (-) |
| G287154 | NA | non-coding | upstream | 181792 | 5023345 ~ 5023593 (-) |
| G287011 | NA | non-coding | upstream | 184568 | 5026121 ~ 5027092 (-) |
| G287161 | NA | non-coding | upstream | 289589 | 5131142 ~ 5140674 (-) |
| G287206 | NA | non-coding | upstream | 309171 | 5150724 ~ 5151489 (-) |
| G287021 | NA | other | downstream | 446664 | 4386145 ~ 4394223 (-) |
| CI01000072_03972493_03983836 | SPA17 | other | downstream | 864820 | 3972401 ~ 3983836 (-) |
| G286005 | NA | other | downstream | 1841392 | 2993769 ~ 2999495 (-) |
| G285752 | NA | other | downstream | 2670229 | 2168048 ~ 2170658 (-) |
| G285766 | NA | other | downstream | 2832578 | 2005551 ~ 2008309 (-) |
| G287264 | NA | other | upstream | 539167 | 5380720 ~ 5382001 (-) |
