Gene
RNA
| Item | Value |
|---|---|
| gene id | G286733 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000072 |
| NCBI id | null |
| chromosome length | 5473029 |
| location | 5052434 ~ 5052660 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU325044 | True | 227 | lncRNA | 0.39 | 1 | 5052434 | 5052660 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000072_04974135_04987086 | ANKRD13B | coding | upstream | 63156 | 4974135 ~ 4990194 (+) |
| CI01000072_04924865_04927684 | PITPNAA | coding | upstream | 123904 | 4924865 ~ 4928530 (+) |
| CI01000072_04891865_04915635 | SLC43A2 | coding | upstream | 136748 | 4891865 ~ 4915686 (+) |
| CI01000072_04883669_04888061 | NA | coding | upstream | 163148 | 4883669 ~ 4889286 (+) |
| CI01000072_04861662_04880150 | MYO1C, MYO1CB | coding | upstream | 171974 | 4861662 ~ 4880460 (+) |
| CI01000072_05082925_05093301 | NA | coding | downstream | 29691 | 5082351 ~ 5093789 (+) |
| CI01000072_05115672_05132153 | NOVA2 | coding | downstream | 62899 | 5115559 ~ 5132273 (+) |
| CI01000072_05256653_05265169 | GIPR | coding | downstream | 203717 | 5256377 ~ 5265203 (+) |
| CI01000072_05285816_05295678 | CLIP3 | coding | downstream | 233115 | 5285775 ~ 5296457 (+) |
| CI01000072_05315380_05336326 | SYNE4 | coding | downstream | 262720 | 5315380 ~ 5336957 (+) |
| G286732 | NA | non-coding | upstream | 172 | 5052048 ~ 5052262 (+) |
| G286722 | NA | non-coding | upstream | 18609 | 5033540 ~ 5033825 (+) |
| G286695 | NA | non-coding | upstream | 60549 | 4991361 ~ 4991885 (+) |
| G286573 | NA | non-coding | upstream | 146316 | 4902980 ~ 4906118 (+) |
| G286746 | NA | non-coding | downstream | 70221 | 5122881 ~ 5127232 (+) |
| G286728 | NA | non-coding | downstream | 90884 | 5143544 ~ 5147539 (+) |
| G286776 | NA | non-coding | downstream | 148514 | 5201174 ~ 5201409 (+) |
| G286779 | NA | non-coding | downstream | 149315 | 5201975 ~ 5202272 (+) |
| G286778 | NA | non-coding | downstream | 154717 | 5207377 ~ 5208102 (+) |
| CI01000072_04831647_04834194 | NA | other | upstream | 220646 | 4831557 ~ 4834707 (+) |
| G286564 | NA | other | upstream | 249486 | 4802453 ~ 4802948 (+) |
| CI01000072_04757636_04762507 | NA | other | upstream | 289924 | 4757583 ~ 4762510 (+) |
| CI01000072_04338747_04342064 | SDHD | other | upstream | 709168 | 4338719 ~ 4343266 (+) |
| CI01000072_04225105_04268007 | SIK2B, SIK2 | other | upstream | 820013 | 4224789 ~ 4268148 (+) |
