CI01000075_00800884_00806063


Basic Information

Item Value
gene id CI01000075_00800884_00806063
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 800780 ~ 806474 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000075_00800884_00806063.mRNA
GTATGAAAATAGTTATGAGGACTTTCTCTCCAGTCCTGTAGAGGGCGGTAAAACTCTTGTTTTCGCTCTTCCTGAAGTGTCAAACTCAGATGTAAACATTCAGCATGGCGTCTGGTGTGTTTTGGTTTTCTCTTCTCCTCGAGCTGTTCGTGCACGCGACAGGATTCACTGAAGTTCAGCAACTCTCAGAGGCATGTTACAAACCGATGAAGGACCACAGACCATCATTCATAAAGACGTATCCCCGGCCTCATGAATATGTAAACGTCTCTGATCTCCCCACCTCCTGGGACTGGCGTAACATTGATGGCAAAAACTATGTAAGCATCACACGCAACCAACACATCCCACAGTACTGCGGCTCATGCTGGGCCATGGGCTCCACCAGTGCACTCGCAGATCGCATAAACATCAAGAGGAAAGGGGCGTGGCCTTCTGCTTACCTGTCTGTGCAGAATGTGATTGACTGTGGCGGGGCGGGGTCATGCTATGGAGGAGATCATCTGGGCGTTTATGCATATGCAAATGAGCGGGGCATTCCTGATGAGACCTGCAATAATTATCAAGCTCGAAATCAAAAATGTGACTCATTTAATCAGTGTGGTACATGCTCATTCTTCGGTTCCTGCTCCATAATTAAAAACTACACGGTGTGGAAAGTCGGAGACTATGGAGACGTCTCAGGGCGAGACCACATGAAGGCTGAGATCTACAAAAATGGGCCAATCAGGCAAGTTTTAAACCTCAAATTTGTAGTGAGCCACAAATGGCCTATTGTTGGGGCTTGCTGTGCAATAATGGCCACTAAAGGCCTGGAGGCGTATGACGGAGGGGTTTTTGCTGAGTTTCACATTCTCTCTGTTCCGAATCACATCATCTCAGTGGCAGGCTGGGGCGTAACAGAGGACGGGACCGAATACTGGATCGTCAGAAACTCCTGGGGCGAGTTCTGGGGAGAGTCGGGCTGGGCCAGGATTGTCACCAGTGCATATAAGGGAGGGAAAGGCAACTGGTACAATGTCGCCATTGAGCACCACTGTGCATATGGAGACCCAATCGTTACGTAGATCTGGAGCAATTCCTCTCATAGAACCATGATGTTCATACACTGGAACTGCCCTGGTATCAGAGGCTATGAACCTGTTATTTTTAATTGCTATAGTTATTTTTTAATATAAACAAATTTTTCAGGATGTAATTCATTGTTGTCATATCAAACATGGGATCGTGTGCCATATTCGAATTTTTAAACCTTAAATCAAATCTGTAAGAGTGTATGTAATTGAGAACGGAAATGATTGATAATATGCTATTAAGTGATACCATGCATGATGCAATTCACTTTATTATTTTATTACAAATCTCTATTTAACACTTGCCAAATACTACAAGAGTGGTAGAGGTTGGTAACTCTTTAAAATATTGCACATCATTATTATTTTTGTTATTATAATTCTGTACTCTTATAGCAGTTACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000075_00800884_00806063.mRNA True 1478 mRNA 0.44 6 800780 806474

Neighbor

gene id symbol gene type direction distance location
CI01000075_00682733_00683937 NA coding upstream 116208 682483 ~ 685507 (+)
CI01000075_00656048_00662437 NAPG coding upstream 137029 656009 ~ 663751 (+)
CI01000075_00548373_00566336 ACSS2L coding upstream 234297 548373 ~ 566483 (+)
CI01000075_00500237_00500551 NA coding upstream 300108 499709 ~ 500672 (+)
CI01000075_00293769_00296813 NA coding upstream 503695 293769 ~ 297085 (+)
CI01000075_00821649_00821906 NA coding downstream 15175 821498 ~ 825595 (+)
CI01000075_00864628_00867240 NA coding downstream 57555 864029 ~ 868077 (+)
CI01000075_00877796_00880322 NA coding downstream 71322 877796 ~ 880444 (+)
CI01000075_00917306_00921588 NA coding downstream 110832 917306 ~ 922416 (+)
CI01000075_01015651_01022674 NA coding downstream 209177 1015651 ~ 1022813 (+)
G288905 NA non-coding upstream 73965 726571 ~ 726815 (+)
G288870 NA non-coding upstream 200343 594128 ~ 600437 (+)
G288838 NA non-coding upstream 223592 574285 ~ 577188 (+)
G288793 NA non-coding upstream 321294 474588 ~ 479486 (+)
G288948 NA non-coding downstream 65924 872398 ~ 872855 (+)
G288956 NA non-coding downstream 107171 913645 ~ 913925 (+)
G288916 NA non-coding downstream 134276 940750 ~ 941054 (+)
G288912 NA non-coding downstream 181661 988135 ~ 992947 (+)
G288755 NA other upstream 492859 305108 ~ 316301 (+)
G288708 NA other upstream 563509 235398 ~ 237271 (+)
CI01000075_01364135_01365758 EEF2B, EEF2L2, EEF2.2, EF2, EEF2 other downstream 522312 1364122 ~ 1365843 (+)
CI01000075_01404076_01444348 UNC13A other downstream 577569 1404076 ~ 1444410 (+)
G289319 NA other downstream 793707 1600181 ~ 1605306 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016943 CABZ01050249.1 coding NC_007113.7 CM002886.2 54043678 ~ 54054225 (-)