CI01000078_00109982_00113960


Basic Information

Item Value
gene id CI01000078_00109982_00113960
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000078
NCBI id null
chromosome length 140406
location 109349 ~ 113960 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000078_00109982_00113960.mRNA
GTTGGTCTGCGCAGTGGGCGGGAACTTTGGATGCACTCTGACCCCATATCCCGAAAGAACAGCAGCAGTGTGGAGAAAGAGGTGTCGGATATGATGAAAAACATGCACTCAATAGCAACTGGTTTGAATGTCTCATTGGACGAGCCGCCTGCCAGTCAGCCGTTACCACCCTCGTCCTTCCAGCGCTTCCTGCGAGTCCAACAGATCCCAGGCCTCGTGCTGGCAGACCATCAGACGTCTTTCGTCAACAGATACTACGAGAGCATGTACGACGACGCAGAGAACCTGAACGTCTCATACCCGCCCAACCTGAGTCCAGACGAGAAGCTGGTGTACGAGACGGAAGCAGCCAAGTCTCTGGCAGAAGTGGCCACGCTAGTCGCTCGATCGCTCTACATGCAGGCAGGAGGAAAAGAGGACAATCTGAACAACATCACTGCCGACCCCAAGATCCTGGTGAAATGGCAGAGCGTTTATCTGACTTGTGTCCTGTCGTCTGTAGGTTCTGGTCCTCCTCAGTTCTACATCGGTCTGGGTCAGCGCACCCACGGCCCCGTGCACAGCGTGACGCGCTTCGTGCAGTATATCATGGCTAACCTGACGGGAACCGTCACCAACCTCACCGAGACCCAGTGCCAGAAACCCGGCGAGATCAGCACTGAGAACAAAGACTTGTACGCGTATTTCTGGGTGTCGGGTCCGTCCGCGGTCAACAGCAGCGGGCCGTTCTGCGTGCGGGCGCCTGTGCGTCTGTCCAAAGCCATCTCGCCTGCCTTCGAGCGGCTGGAGTACGGATCTCGGGATTATTCCACGTGGACCGAGTCTCGCTGGAAGAGCATCCGAGCGCGCGTCTTCCTGGTGGCCAGCCGAGAACTCGAGATGTTAACACTGGGGGTGGGCGTGGCTGTGCTGCTGCTGTCTCTATTGGTGACGTACTTCATCAGCTCGAAGGCGGAGCTTTTGTTTAGCTCCGCCCGTGAAACGCCCACAACGACCTACTGAACAGAATCTCCAGCCATCCATTCATTCCCCTTCAGCACAGAAACACACTTCAGTTCAAGAGTAATTTATTCTAACCTGACAGGATTGTGCCGCACTGGTTTTAGCTGGGCTGGACTGAACTGCTCTGGTCTCCTGGAAAGTTGTTCATATTCTTTTTGTCATCTTTTTTTTTTATAATTCCAGATGTTTTTTTTTTCTGATTATGACATGGACGGGCACAAACAAAGCTGATTTTAAGTGTTTAAAGTTGAGAATAATTGAGTGAGTGAATGTTAATTTGATGTGTGTGTGTGTGTGTGTGTTGACATGAAAGCAGTGAGTATGTGCAATAGCTTACTGAGTTAATTTCATACTTCATTTTGATGTGGATGTTTTTATTTGGGAATGTAAAGCTGTCCATTCTGGACGTGTGATCTATTCGTTGACGACTGTAATGACACAATTAAACTCTAATCACAGACTGTCCGCAATGAATCGCTCATCATGTTTCCACTGGAGACGCGGAGCTTCGAAAAACCAAATTAACACTGATATGCAGCATTTGTTTGTTGACTTTAATTGAATGAAAGCTGTTTGATTAATGATGTCATTATTTTTTCTCTAAGAAACTGTTGCCTTGAGAACCTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000078_00109982_00113960.mRNA True 1635 mRNA 0.49 7 109349 113960

Neighbor

gene id symbol gene type direction distance location
CI01000078_00078859_00090123 NA coding downstream 19226 78731 ~ 90123 (-)
CI01000078_00064946_00068618 NA coding downstream 40320 64753 ~ 69029 (-)
CI01000078_00128174_00129631 NA coding upstream 13821 127781 ~ 129993 (-)
CI01000078_00134116_00134872 NA coding upstream 19815 133775 ~ 134872 (-)
G289892 NA non-coding downstream 6589 99109 ~ 102760 (-)
G289895 NA non-coding downstream 66751 39522 ~ 42598 (-)
G289920 NA non-coding upstream 1921 115881 ~ 116270 (-)
G289921 NA non-coding upstream 12412 126372 ~ 126781 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00012042 NA coding CM030138.1 CM030138.1 9195997 ~ 9203737 (+)