CI01000081_00711138_00730099


Basic Information

Item Value
gene id CI01000081_00711138_00730099
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000081
NCBI id null
chromosome length 1644768
location 710221 ~ 730099 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000081_00711138_00730099.mRNA
CTCTCCTCTACAAGCCTATTGACCGTGTCACTCGCAGCACTCTTGTCCTGCATGATTTGTTGAAACACACCCCTAAGGATCATCCAGACTTCCCATTACTGCAGGATGCTCTGAGAATATCCCAGAACTTCTTGTCCAGCATCAATGAAGAGATTGACCCACGCAGGACTGCCGTGACCACACCAAAGGGAGAGGTGTGCGACTTTGTGTGTTTGTGCAACTTTGTTTGTTTGTGTGACAGGAAAAAGTATGAAGTATGCTGTATTTTTCATATACAGTCCTTTACTGCTCGTCAGCTGGTGAAGGATGGCTTCCTGGTGGAGGTGTCGGAGGGGACACGTAAACTTCGTCATGTCTTCCTCTTCACAGACCTTCTGCTCTGTGCCAAGATGAAAAAGACAGCAGTTGGGAGGCAACAGCAGTATGAGTGTAAATGGTACATCCCTCTGGCTGATGTGAGCTTCCAGACCCTGGATGACTCTGACTCTCTCCCTCACGTCCAGACACTCCCTGAGCACGAGATTGAGGAGATGAAGATCAAGATCTCTTCCATCAAAAGTGAGATCCAGAAAGAGAAGAAAGCACAGAAGGGTCAGAGTCGTAACGTGGATCGTCTCAGGAAGAAGATGAATGAGCAGGAGTCGTGTCTGCTATTACACTCCCCCACCATCCCATTCCGCATCCACAACAAACACGGCAAGAACCACCTGTTCCTGCTGTCCTCAGATTATGAGAGGTCAGAATGGAGGGAAAGCATTCAGAAACTGCTGAAGAAAGAATTGTGTCCAAGGGAAAGAAAAACTCCAAATTTGGCACATATCAACCCAAAAATTAGTCACATGGCACCTGGAAGGTTTTCAAGTTCATCCATGACAATGGCTCAGTCTAGAATAATGCTGTGCATGAAGACTCCAAATGTAGTTCTTGTGGAGGAAGAATCCTGGCTGTCTTCTGTTATCACGGTCAGAATCCCGAAGAAGGGTGTCACAATCACAGTCCTAATAAAAGGAACAGCAATATCACAATTCTGGTTACATTACAATTTAAAATCACAAATGTACATATAACAAAGTACCAGGTCTACGTACAACTAACAGAGATTAATTATGGTTGTTATAGGGATAGTTCACCCAAAAATGAAAATCCTCATTAATTACTCACCCTCATGTTGTTCCACACCTGTAAGACCTTCGTTCATCTTCGGAACACAAATTAAGATATTTTTGATGAAATCCAAGAGCTTTCTGACCCCTCCATAGACAGCAATTTAATTACTACTTTCAAGGTCCAGAAAGGTACTAAAGACATTGTTAAAATAGTCCATGTGACTGCAGTGGTTCAACCTTAATGTTATGAAGCGACGAGAATACTTTTTGTGCAGAAAAACAAAACAAAAATAACGACTTTATTCAACAATCTCTTCTCTTCCCTGTCAGTCTCCTACTCTGTTGACATAGCAAACACAGTCCACAGCTTCCGTGTTCTACATCAGAATGCCAGCTCAGTGTTGGCCGACTCCTGCATCAGCATCACACACGCGTCATGCTGCTCACGTGAACAGCGTCAGCCAATACTGAGCCGGCATTCTGACATAGAACCTGGAAGCACTGAACGTAAACAGCGTAGGAGAATGAAATGGAAGAAAAGAAATTGTTGAATAAAGTCGTTATTTTTGTTTTGTTTTTGTGCACAAAAAGTATTCTCGTCTCTTCATAACATTAAGGTTGAACCACTGCAGTCACATGACTGTTTTAACAATGTCTTTAGTACCTTTCTGGACCTTGAAAGTGATGATTATATTGCTGTCTATGGACGAGTCATATACCTCTCGTATTTCATCAAAAATATCTTAATTTGTGTTCTGAAGATAAACGAAGGTCTTACGGGGTGTAGAACGACATGAGGGTGAGTAATTAATGACAGAAACTTCATTTTTAGGTGAACTAACCCTTTAAAGTATTGTCTGGTAGATAGACAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000081_00711138_00730099.mRNA True 1984 mRNA 0.42 7 710221 730099

Neighbor

gene id symbol gene type direction distance location
CI01000081_00667482_00669046 NA coding downstream 39871 667072 ~ 670350 (-)
CI01000081_00572809_00607442 ABR, ABR.L coding downstream 102779 572809 ~ 608977 (-)
CI01000081_00348791_00392579 ZSWIM7 coding downstream 317642 348369 ~ 392579 (-)
CI01000081_00250859_00331161 NA coding downstream 378724 248792 ~ 331497 (-)
CI01000081_00101187_00103913 TIMM22 coding downstream 606159 100838 ~ 104062 (-)
CI01000081_00792317_00798403 NA coding upstream 62148 792247 ~ 798494 (-)
CI01000081_00886474_00887256 NA coding upstream 155814 885913 ~ 887507 (-)
CI01000081_00909217_00959900 ASPA coding upstream 179118 909217 ~ 959900 (-)
CI01000081_00965281_00975396 NA coding upstream 233976 964075 ~ 975396 (-)
CI01000081_01113021_01116319 NA coding upstream 382819 1112918 ~ 1116479 (-)
G294126 NA non-coding downstream 61344 644919 ~ 648877 (-)
G294138 NA non-coding downstream 88649 517862 ~ 621572 (-)
G293708 NA non-coding downstream 203927 506084 ~ 506294 (-)
G293704 NA non-coding downstream 212461 497535 ~ 497760 (-)
G294211 NA non-coding upstream 499912 1230011 ~ 1232101 (-)
G294203 NA non-coding upstream 509900 1239999 ~ 1244600 (-)
G294201 NA non-coding upstream 517007 1247106 ~ 1266501 (-)
G294200 NA non-coding upstream 553147 1283246 ~ 1283879 (-)
G294282 NA non-coding upstream 562203 1292302 ~ 1293559 (-)
G294131 NA other downstream 108050 555638 ~ 602171 (-)
G293666 NA other downstream 276377 433383 ~ 433844 (-)
G293573 NA other downstream 488999 220259 ~ 221222 (-)
CI01000081_01486444_01511240 NA other upstream 767965 1485102 ~ 1512980 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G17904 abr unknown NC_035899.1 CM008302.1 11177908 ~ 11190080 (+)