XLOC_001081



Basic Information


Item Value
gene id XLOC_001081
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 13733386 ~ 13747118 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00003364
gcttgattagtccaggtgtgtctgatcacacacttaccgcATTCACCTGCACacgaaatcaaatgctgaatcaaaactttttaaaaccctgAAACAATGTTGCAGTtagttttgcatgctggaggaaggatcaCACCAttgctgaagtatttcttttagacagTTTTGTGTGCCGTGGCCAAATGGATGCACATCTCCACTCCTCATTGTCTTGACCTGGCAATGAGCACTTCTGCCTCTGTCCATTTATACGGCTTCTCTTTGTCTGATAATGAAGAGTTACGCCAACAGAAGCACTCTAAAAAGCCGCATAACAGTGATTACCAAAAGAGGTTGTAAAGGGAAGAAAAAAAGAAAGACTCCGGCTCGAGGGATTATGCCCCATTCATGCACTGGTCAATAGTCCGAAAGCGTTTTCTTGTTTACAGcccAAACACAAGTTAGCAAAAGATGGCATCTTCAACAACATTACTTTACGATAACTTAACAATAATTAATGTATCGTTTGACTGAGAGTGAAATCGTAGAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00003364 True 529 lncRNA 0.41 4 13733386 13747118

Neighbor


gene id symbol gene type direction distance location
XLOC_001078 NA coding downstream 55138 13364806 ~ 13678248 (-)
XLOC_001080 FP236197.1 coding downstream 129007 13596298 ~ 13604379 (-)
XLOC_001079 NA coding downstream 244564 13485275 ~ 13488822 (-)
XLOC_001077 pcdh18a coding downstream 461817 13260809 ~ 13271569 (-)
XLOC_001076 NA coding downstream 529389 13066004 ~ 13203997 (-)
XLOC_001082 BX539308.1 coding upstream 35812 13782930 ~ 13783046 (-)
XLOC_001083 NA coding upstream 106353 13853471 ~ 13931500 (-)
XLOC_001084 elf2b coding upstream 210117 13957235 ~ 13989643 (-)
XLOC_001085 CR388002.1 coding upstream 327189 14074307 ~ 14074375 (-)
XLOC_001086 NA coding upstream 360582 14107700 ~ 14115410 (-)
XLOC_001075 NA non-coding downstream 710594 12824087 ~ 13022792 (-)
XLOC_001090 NA non-coding upstream 650634 14397752 ~ 14406391 (-)

Expression



Co-expression Network