CI01000091_00108499_00117102 (CDKL1)


Basic Information

Item Value
gene id CI01000091_00108499_00117102
gene name CDKL1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 108220 ~ 119109 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000091_00108499_00117102.mRNA
AGCGTGTATGTGCGTAATAGAGGTCATATTATATCAAATGTGCATAGTAGATAAGGCCATATAATATAAATCATAACCATAAAGACAATATTAACTAAATGACTGGCAGTTTATGTTGTCATTGTACAACAAAAATAATTTAATATTATCTGGAAAATATGAATACTAATTAAAAATAATTAATAATAATTCAAATAATTCATTTGTATAGCGCTTACAAAGATCCAAAGATCATTTTTCCTAAATAATAATAATAAATAAATAAATTTAAAAATGATTTTTCCTCATGAAATTTTCCGTGGACCTCTAGTACCCCCTTGTGGTCTTGAACCCCAGTTTGAAATCCCTGATAGTGGAGACAAGAAATGTAAATAAGTGTAATGTAACGTTATATATATAATTAAATATTTATGAAAATGATTTTTAATAGAAAATATGCTAACTGTTTTTTTTTTTTTTTATCTAAACGACTGACCATGTTAAAAAAAAATCACAATATGAAAATTACAGTATGTTATATATATATATAACAGTATAATCACAATATATACTGTTATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCCAGTGCACAATCAACGTACACATATACCATACGAGTCTCACAGAGGTGGAAGGGTTGTGTTGCTCTGTGATCACTTACACCAGCTCACTGAGCTCAGAGCCTGACCCAGCCTGAGCGCTATGCGCTATAGCTGCGTGTTGTGGATACATTGAAGTGCAGCCGATAGTTCTATTACTGTCATTACGTCGTACGTGCGTAAGAACACTTCTAAAAGGACTCACTTGAGTGAACAAATCAATGACTATCCAGTGACATTTCTATATATTGTCACTGATCTGGAATGAATGCTTATGTCTACTAGGATGCAGCTTTCTGGAAGACAATGCCTCAGGAAAGAGCAGGCACTAAACTAAAAGAACTGCGTGTTTGTATCTCATGAGGAATACTTGCGACCGTAATAAATATTGAAATGATGTTTGGAGTCAAAGAGGAAGAACTGTTATTCCTTAACAAAGAGGAGAAAAGAAAAGCTTTGGAATTGTAATTTACACGAGTCATTCCTCAGGTAAGGTGACCAGGCAACGTAGATTGTGCTTTTAAATCACATTTACGTTTTAGCTTATTTGAATTAGATAGCCTAGTCATTAATCATGTTGTGATTTTTTTTTAACATGGTCAGTCGTTTAGATAAAAAAAAAAAAAAAAAAAAAAAAAAACAAATTAAAAAAAACAGTTAGCATATTTTCTATTAAAAATCATTTTCATAAATATTTAATTAGGCTAGGTATTCATTAAATAGAAGAAAGTAACAACAACAATGTCTTTTTTGCCCAGTGCCCACTGGATGACAACTAGCCTACATTACAGTGTACATAAATATGTATACACAACTAAAGGAGCTTTAAAAGTAATAGACAAATGACCAACATAAGCTTTATTTGTGTTATTTTCATAGCTTTGGAAATACGCAATGTAATTTTTATTACTATAGTAATTGATAATATTAACATACACTGTACAAAATGTTTTTTCAGGTAATATCTAAATTAACTGTTTTATTCAAGATAAAAATAGAAATGGTTCTCTAATTTTATAGAAATGGTTTACTATGTTTGGTCATGAAAAACTTGACTGGCTTGCACAAACCCCTTTGGGATGAATTGCAGTACTGCCTGTTAGCAGTATCTGAGCTTTCTGGTGCTCTTTTGCCTGAATGGGAGCAAATCAGTCCTTATTTCCAAAAGAATGGGGCTGTTATTATAGCAAAGGGAGGACCAACCTTTATTAATGATCAAGTTTTTGAAATTAATAGCACATGTGGATGTGTTGTTTGGGTGTGCATACTTTTGACATATAGCGTCTCTCCCAGAAATGAAAATTCTGTCATCGTTTATTTATATTGTTTACACCAAATGACACACTTTGTTTGTTTATTTGTTTGTTTGCAGTATGTAACTCTTCATGATCTCTGTGAGATGGATAAGTATGAGAAACTGGCTAAGATTGGCGAGGGCTCATATGGAGTTGTGTTCAAATGCAGACACAGGGACACAGGTCAGATAGTGGCCATTAAAAAATTTGTAGAGTCTGAAGATGATCCAGTCATTAAGAAGATTGCATTGAGAGAAATCCGCATGCTAAAGCAGTTGAAGCATGTGAATTTGGTGAATTTGCTTGAGGTCTTCAGGAGAAAGAGACGCCTTCATCTGGTCTTTGAGTTCTGTGAGCAAACTGTTCTAAATGAACTGGACCAGCACCCCAGAGGGGTTCCTGAAGCACAACTCAAGAGTATTGTGTGGCAAACTCTACAAGCTGTGAACTTCTGTCACAAACACAATTGTATCCACCGGGACGTAAAACCAGAGAACATTCTTCTGACCAAGACCAGTGTGATCAAACTATGTGATTTTGGCTTTGCTCGCATCCTCAGTGACTTGATCCCACGGCATCAGCAGGTGTTCCGGTCCAATATCTTCTTTAGCGGAGTCAGCATCCCTGAGCCTGATACCATGGAGCCGCTAGAGAAGAGGTTCCATGATGTTTCTCCTCATGCTATTACTGTGATGAAGGCAGTGACACTCTTAACCTGTGCCAAAGATCGCATCTAAATTCAAAAATGGTGTGCAAATCATGAATGGCATTGGTTCTCACAATGTAGTTAAACAGTAGAGCATGACACTAACAATGCCTAGATCAGAAGACTGATTCCCAAGAAATGCATGAGCTGATAAAATGTACACCGTGAATGAAATATAAGTTACTTTGGATAAAAAGCAATGCGTAACATGAGTGTGTTAATAATGACAGAATTTTAGTTTTTGGTAAATTGAAGATAAAATCCTCACTAAGTACAGCTCTCAACACCAAGACAACAACAACAAAATAAA

Function

symbol description
cdkl1 Enables protein kinase activity. Acts upstream of or within protein phosphorylation. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in several structures, including hypochord; nervous system; pleuroperitoneal region; spinal cord neural keel; and spinal cord neural tube. Orthologous to human CDKL1 (cyclin dependent kinase like 1).

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K08824 CDKL; cyclin-dependent kinase-like

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000091_00108499_00117102.mRNA True 2919 mRNA 0.35 7 108220 119109

Neighbor

gene id symbol gene type direction distance location
CI01000091_00265846_00269683 NA coding upstream 146731 265840 ~ 270360 (-)
CI01000091_00337653_00338300 CLDN3A coding upstream 218538 337647 ~ 338587 (-)
CI01000091_00346274_00346930 NA coding upstream 226908 346017 ~ 347510 (-)
CI01000091_00348777_00349430 NA coding upstream 229358 348467 ~ 349729 (-)
CI01000091_00400737_00412559 NA coding upstream 281331 400440 ~ 412559 (-)
G302504 NA non-coding downstream 64314 42712 ~ 43906 (-)
G302902 NA non-coding upstream 2866 121975 ~ 130074 (-)
G302924 NA non-coding upstream 32094 151203 ~ 151551 (-)
G302931 NA non-coding upstream 45094 164203 ~ 164408 (-)
G302934 NA non-coding upstream 47648 166757 ~ 166971 (-)
G302937 NA non-coding upstream 50841 169950 ~ 170450 (-)
G303047 NA other upstream 355493 474602 ~ 562944 (-)

Expression


Co-expression Network